ggKbase home page

PLM3_127_b2_sep16_scaffold_8

Search features with annotation key words

Displaying items 121-150 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8_121
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(131340..132509)
DNA (1170bp) protein (390aa)
glycosyl transferase family 1 Tax=Halomicrobium katesii RepID=UPI000366F857
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACV48863.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 /; NCIMB 13541) (Haloarcula mukohataei).;"
PLM3_127_b2_sep16_scaffold_8_122
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(132493..133524)
DNA (1032bp) protein (344aa)
Glycosyl transferase group 1 Tax=Thermincola potens (strain JR) RepID=D5XD01_THEPJ
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADG83677.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
PLM3_127_b2_sep16_scaffold_8_123
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(133524..134573)
DNA (1050bp) protein (350aa)
hypothetical protein Tax=Microbacterium sp. 292MF RepID=UPI000361A2D7
Group 1 glycosyl transferase {ECO:0000313|EMBL:EWT02787.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
group 1 glycosyl transferase
PLM3_127_b2_sep16_scaffold_8_124
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134570..135721)
DNA (1152bp) protein (384aa)
Glycosyl transferase group 1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UI09_ANASK
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACL67562.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
PLM3_127_b2_sep16_scaffold_8_125
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(135765..136913)
DNA (1149bp) protein (383aa)
ABC transporter related Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZW37_OPITP
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACB76051.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3_127_b2_sep16_scaffold_8_126
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(136910..137695)
DNA (786bp) protein (262aa)
ABC-2 type transporter Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZX5_HERA2
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_127_b2_sep16_scaffold_8_127
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138245..139225
DNA (981bp) protein (327aa)
Glycosyltransferase Tax=Rhodobacter sp. AKP1 RepID=L1KHV7_9RHOB
Glycosyltransferase {ECO:0000313|EMBL:EKX59978.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
Glycosyl transferase, group 1
PLM3_127_b2_sep16_scaffold_8_128
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140007..141206
DNA (1200bp) protein (400aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003789B04
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM3_127_b2_sep16_scaffold_8_129
RLO_PLX_64_10, Bacteria

Not on your lists

141203..142318
DNA (1116bp) protein (372aa)
Putative glycosyltransferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7I0_CALAS
putative glycosyltransferase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_8_130
unknown

Not on your lists

142315..144597
DNA (2283bp) protein (761aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_131
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(144783..145727)
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7D6_CALAS
hypothetical protein
Tax=CG_Arma_01
PLM3_127_b2_sep16_scaffold_8_132
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

145852..146385
DNA (534bp) protein (178aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036D4AB7
Uncharacterized protein {ECO:0000313|EMBL:KJY29728.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8_133
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(146527..147291)
DNA (765bp) protein (255aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035D82F7
Putative F420-dependent oxidoreductase {ECO:0000313|EMBL:EFH82656.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
F420-dependent oxidoreductase
PLM3_127_b2_sep16_scaffold_8_134
unknown

Not on your lists

comp(147427..147612)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_135
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(147664..148128)
DNA (465bp) protein (155aa)
PAS domain S-box/urea ABC transporter, urea binding protein Tax=Microcoleus sp. PCC 7113 RepID=K9WLA8_9CYAN
PAS domain S-box/urea ABC transporter urea binding protein
PAS domain S-box/urea ABC transporter, urea binding protein {ECO:0000313|EMBL:AFZ20554.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM3_127_b2_sep16_scaffold_8_136
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(148116..148631)
DNA (516bp) protein (172aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00036D02C5
putative two-component system sensor kinase
Putative two-component system sensor kinase {ECO:0000313|EMBL:BAL89449.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_127_b2_sep16_scaffold_8_137
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

148831..149760
DNA (930bp) protein (310aa)
hypothetical protein Tax=Demetria terragena RepID=UPI00036B8E09
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM13631.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
ABC-type multidrug transport system, ATPase component
PLM3_127_b2_sep16_scaffold_8_138
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

149748..150509
DNA (762bp) protein (254aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI000375FB2F
Uncharacterized protein {ECO:0000313|EMBL:EST29673.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8_139
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(150692..151840)
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase domain-containing protein Tax=Micromonospora RepID=D9T479_MICAI
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AKG45178.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
acyl-CoA dehydrogenase domain-containing protein
PLM3_127_b2_sep16_scaffold_8_140
Dietzia sp. UCD-THP, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

151991..152962
DNA (972bp) protein (324aa)
UDP-glucose 4-epimerase Tax=Dietzia alimentaria RepID=UPI00029A8CB0
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EYT62314.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia sp. UCD-THP.;"
NAD-dependent epimerase/dehydratase
PLM3_127_b2_sep16_scaffold_8_141
unknown

Not on your lists

152959..153081
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_142
unknown

Not on your lists

comp(153105..153530)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_143
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(153969..155843)
DNA (1875bp) protein (625aa)
Carbamoyl-phosphate synthase L chain ATP-binding Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LY72_ACIFD
carbamoyl-phosphate synthase L chain ATP-binding
Carbamoyl-phosphate synthase L chain ATP-binding {ECO:0000313|EMBL:ACU53680.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
PLM3_127_b2_sep16_scaffold_8_144
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(155843..157534)
DNA (1692bp) protein (564aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ADU51503.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ADU51503.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Propionyl-CoA carboxylase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SML1_THEM7
PLM3_127_b2_sep16_scaffold_8_145
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(157531..158430)
DNA (900bp) protein (300aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:ABK52175.1}; EC=4.1.3.4 {ECO:0000313|EMBL:ABK52175.1};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Hydroxymethylglutaryl-CoA lyase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRW5_ACIC1
PLM3_127_b2_sep16_scaffold_8_146
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(158570..159220)
DNA (651bp) protein (217aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A2G2_9ACTN
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_8_147
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

159447..160367
DNA (921bp) protein (307aa)
Lipoprotein LpqB, GerMN domain protein Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CHB0_DESK7
lipoprotein LpqB, GerMN domain-containing protein
Tax=BJP_IG2069_Clostridiales_42_11
PLM3_127_b2_sep16_scaffold_8_148
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(160415..161323)
DNA (909bp) protein (303aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase Tax=Oscillibacter sp. 1-3 RepID=R9M5V6_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
PLM3_127_b2_sep16_scaffold_8_149
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

161449..163017
DNA (1569bp) protein (523aa)
Carboxyl transferase Tax=Chloroflexus RepID=A9WH57_CHLAA
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:ABY35569.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
PLM3_127_b2_sep16_scaffold_8_150
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

163170..163739
DNA (570bp) protein (190aa)
hypothetical protein Tax=Microbulbifer variabilis RepID=UPI00037D1DB4
Uncharacterized protein {ECO:0000313|EMBL:EEF57162.1}; Flags: Precursor; Fragment;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
Displaying items 121-150 of 197 in total

View Taxonomy