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PLM3_127_b2_sep16_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_2
unknown

Not on your lists

611..1285
DNA (675bp) protein (225aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_3
unknown

Not on your lists

comp(1332..1850)
DNA (519bp) protein (173aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2140..2472
DNA (333bp) protein (111aa)
Putative transposase (Fragment) Tax=Rhodococcus opacus M213 RepID=K8X5E3_RHOOP
Putative transposase {ECO:0000313|EMBL:EKT76769.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
ISRSO5-transposase transposase
PLM3_127_b2_sep16_scaffold_8_5
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2676..3242
DNA (567bp) protein (189aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI000373BFC4
Uncharacterized protein {ECO:0000313|EMBL:KDN79120.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8_6
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3632..3913)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4YXY9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM63165.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4283..6556
DNA (2274bp) protein (758aa)
Site-specific recombinase/DNA invertase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P670_AROAE
pinR; site-specific recombinase/DNA invertase
Site-specific recombinase/DNA invertase {ECO:0000313|EMBL:CAI07191.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM3_127_b2_sep16_scaffold_8_8
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7046..9712)
DNA (2667bp) protein (889aa)
8-amino-7-oxononanoate synthase Tax=Actinoplanes sp. N902-109 RepID=R4LQC4_9ACTO
8-amino-7-oxononanoate synthase
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:AGL17405.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM3_127_b2_sep16_scaffold_8_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(9880..11433)
DNA (1554bp) protein (518aa)
Diguanylate cyclase with PAS/PAC sensor Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5F0_SPHTD
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACZ37466.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_8_10
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11436..11999)
DNA (564bp) protein (188aa)
Oxidoreductase molybdopterin binding Tax=Mycobacterium rhodesiae JS60 RepID=G4HWT7_MYCRH
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:EHB55075.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8_11
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12146..14659)
DNA (2514bp) protein (838aa)
Putative cation-transporting ATPase Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YMN8_NOCFA
cation-transporting ATPase
Putative cation-transporting ATPase {ECO:0000313|EMBL:BAD60553.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM3_127_b2_sep16_scaffold_8_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14983..15264
DNA (282bp) protein (94aa)
Putative uncharacterized protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q6L5_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU74050.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_127_b2_sep16_scaffold_8_13
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15296..15508
DNA (213bp) protein (71aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI000379E929
heavy metal transport/detoxification protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_127_b2_sep16_scaffold_8_14
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15549..17765
DNA (2217bp) protein (739aa)
copA; copper-transporting ATPase CopA (EC:3.6.3.4)
Copper-transporting ATPase CopA {ECO:0000313|EMBL:BAN03503.1}; EC=3.6.3.4 {ECO:0000313|EMBL:BAN03503.1};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Copper-transporting ATPase CopA Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3S6_9ACTN
PLM3_127_b2_sep16_scaffold_8_15
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17945..18403)
DNA (459bp) protein (153aa)
Transcriptional regulator, MerR-family Tax=Amycolatopsis azurea DSM 43854 RepID=M2PS57_9PSEU
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AJK52503.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
PLM3_127_b2_sep16_scaffold_8_16
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18765..20822)
DNA (2058bp) protein (686aa)
LigA Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UT58_9ACTO
LigA {ECO:0000313|EMBL:EGD43806.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
copper resistance protein CopC
PLM3_127_b2_sep16_scaffold_8_17
Streptomyces sp. F12, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20938..21891)
DNA (954bp) protein (318aa)
hypothetical protein Tax=Nocardiopsis synnemataformans RepID=UPI00036A839C
Integral membrane protein {ECO:0000313|EMBL:AHE40226.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. F12.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8_18
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21888..22238)
DNA (351bp) protein (117aa)
CopY family transcriptional regulator Tax=Frankia sp. BMG5.12 RepID=UPI0003680E87
CopY family transcriptional regulator {ECO:0000313|EMBL:KKA37925.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
Transcriptional regulator, MecI family
PLM3_127_b2_sep16_scaffold_8_19
unknown

Not on your lists

comp(22363..22620)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_20
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22691..23332
DNA (642bp) protein (214aa)
hypothetical protein Tax=Nocardiopsis synnemataformans RepID=UPI0003692A44
Redoxin domain protein {ECO:0000313|EMBL:CCH74555.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
redoxin domain-containing protein
PLM3_127_b2_sep16_scaffold_8_21
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23320..24042
DNA (723bp) protein (241aa)
Cytochrome c biogenesis protein, transmembrane region Tax=Streptomyces zinciresistens K42 RepID=G2GM55_9ACTO
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG80419.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
PLM3_127_b2_sep16_scaffold_8_22
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24048..24602
DNA (555bp) protein (185aa)
Thiol-disulfide isomerase-like thioredoxin Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQ57_BLASD
Thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:CCG02826.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_127_b2_sep16_scaffold_8_23
unknown

Not on your lists

24646..24810
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_24
unknown

Not on your lists

comp(24830..25096)
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_25
unknown

Not on your lists

comp(25166..25474)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_26
unknown

Not on your lists

25603..27036
DNA (1434bp) protein (478aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8_27
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27251..27631)
DNA (381bp) protein (127aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
Ribonuclease VapC Tax=Mycobacterium smegmatis JS623 RepID=L0IRB9_MYCSM
putative nucleic acid-binding protein, contains PIN domain
PLM3_127_b2_sep16_scaffold_8_28
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27649..27879)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W9W0_KINRD
Uncharacterized protein {ECO:0000313|EMBL:KHL18986.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8_29
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27915..29417)
DNA (1503bp) protein (501aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003820EE5
Peptidase {ECO:0000313|EMBL:KHD73710.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_8_30
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29779..30024)
DNA (246bp) protein (82aa)
Acyl-CoA dehydrogenase Tax=Mycobacterium smegmatis JS623 RepID=L0IXV8_MYCSM
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB23924.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
Displaying items 1-30 of 197 in total

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