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PLM3_127_b2_sep16_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_10_1
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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664..849
DNA (186bp) protein (62aa)
DNA binding domain protein, excisionase family Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6MXC0_GORPV
excisionase family DNA binding domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:GAC47483.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108223.;"
PLM3_127_b2_sep16_scaffold_10_2
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

846..1949
DNA (1104bp) protein (368aa)
Putative Integrase family protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z3R6_9ACTN
integrase
Tax=RBG_16_Acidobacteria_64_8_curated
PLM3_127_b2_sep16_scaffold_10_3
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2878..3543
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Streptomyces sp. HGB0020 RepID=S2YI23_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD63936.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_10_4
unknown

Not on your lists

3719..3940
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10_5
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3924..4757)
DNA (834bp) protein (278aa)
hypothetical protein Tax=Streptomyces globisporus RepID=UPI00029A1EFD
Uncharacterized protein {ECO:0000313|EMBL:KIX32406.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus.;"
Helix-turn-helix domain protein
PLM3_127_b2_sep16_scaffold_10_6
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4760..5440)
DNA (681bp) protein (227aa)
Putative uncharacterized protein Tax=Streptomyces griseus XylebKG-1 RepID=G0PPJ6_STRGR
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
PLM3_127_b2_sep16_scaffold_10_7
Prevotella sp. F0091, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5692..6951)
DNA (1260bp) protein (420aa)
hypothetical protein Tax=Prevotella veroralis RepID=UPI00036FE32F
Uncharacterized protein {ECO:0000313|EMBL:ERJ72069.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. F0091.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_10_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6987..8207)
DNA (1221bp) protein (407aa)
Putative Integrase family protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z2U2_9ACTN
Putative Integrase family protein {ECO:0000313|EMBL:CCM65244.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
integrase/recombinase domain-containing protein
PLM3_127_b2_sep16_scaffold_10_9
unknown

Not on your lists

comp(8313..8501)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8507..10510)
DNA (2004bp) protein (668aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003706368
Cell division protein FtsK {ECO:0000313|EMBL:KHD77180.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
DNA translocase ftsK
PLM3_127_b2_sep16_scaffold_10_11
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10903..12183)
DNA (1281bp) protein (427aa)
Bifunctional DNA primase/polymerase Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UZE0_9MICC
Bifunctional DNA primase/polymerase {ECO:0000313|EMBL:EMY35756.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
bifunctional DNA primase/polymerase
PLM3_127_b2_sep16_scaffold_10_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12180..13097)
DNA (918bp) protein (306aa)
Bifunctional DNA primase/polymerase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZ37_ACTS5
DNA primase {ECO:0000313|EMBL:KHD78875.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
bifunctional DNA primase/polymerase
PLM3_127_b2_sep16_scaffold_10_13
Streptomyces filamentosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13097..13978)
DNA (882bp) protein (294aa)
methyltransferase Tax=Streptomyces filamentosus RepID=UPI0001AF2B62
Uncharacterized protein {ECO:0000313|EMBL:EWS91639.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseosporus NRRL 11379.;"
Prophage DNA modification methylase
PLM3_127_b2_sep16_scaffold_10_14
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(14058..15017)
DNA (960bp) protein (320aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00037DB75B
DNA methyltransferase
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3_127_b2_sep16_scaffold_10_15
Bacteriophage Lily, Caudovirales, Viruses

Not on your lists

comp(15228..15734)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8I6_9BACI
Uncharacterized protein {ECO:0000313|EMBL:AJK27784.1}; species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Bacteriophage Lily.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_10_16
unknown

Not on your lists

comp(15731..16273)
DNA (543bp) protein (181aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10_17
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(16273..16761)
DNA (489bp) protein (163aa)
Tax=RBG_16_Planctomycetes_41_13_curated
PLM3_127_b2_sep16_scaffold_10_18
unknown

Not on your lists

comp(16758..16961)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10_19
Streptomyces sp. SM8, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16973..17728)
DNA (756bp) protein (252aa)
hypothetical protein Tax=Actinomyces timonensis RepID=UPI0002D6D6DB
Uncharacterized protein {ECO:0000313|EMBL:EKC92482.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SM8.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_10_20
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17725..18264)
DNA (540bp) protein (180aa)
Putative uncharacterized protein Tax=Streptomyces zinciresistens K42 RepID=G2GE86_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGX58164.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
PLM3_127_b2_sep16_scaffold_10_21
unknown

Not on your lists

comp(18461..18649)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10_22

Not on your lists

comp(18646..19284)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PPQ3_9ACTO
NLP/P60 protein {ECO:0000313|EMBL:EQD70372.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NLP/P60 protein
PLM3_127_b2_sep16_scaffold_10_23
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19281..19847)
DNA (567bp) protein (189aa)
NLP/P60-family secreted protein Tax=Streptomyces sp. C RepID=D9VUN5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY20207.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
putative NPL or P60 family secreted protein
PLM3_127_b2_sep16_scaffold_10_24
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19840..20979)
DNA (1140bp) protein (380aa)
Putative FHA domain containing protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A574_THECD
putative FHA domain containing protein
Putative FHA domain containing protein {ECO:0000313|EMBL:ACZ00060.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_10_25
unknown

Not on your lists

comp(20976..21359)
DNA (384bp) protein (128aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10_26
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21570..21734)
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B2L5_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH08771.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_127_b2_sep16_scaffold_10_27
unknown

Not on your lists

comp(21731..22027)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10_28
unknown

Not on your lists

comp(22112..22654)
DNA (543bp) protein (181aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10_29
unknown

Not on your lists

comp(22651..23265)
DNA (615bp) protein (205aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10_30
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23262..23537)
DNA (276bp) protein (92aa)
DNA binding domain protein, excisionase family Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PKU1_KRIFD
DNA-binding protein {ECO:0000313|EMBL:ETK30967.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
excisionase family DNA binding domain-containing protein
Displaying items 1-30 of 172 in total

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