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PLM3_127_b2_sep16_scaffold_25

Search features with annotation key words

Displaying items 31-60 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_25_31
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34524..35441
DNA (918bp) protein (306aa)
pleD; response regulator PleD (EC:2.7.7.65)
Response regulator/GGDEF domain-containing protein Tax=Arthrobacter sp. SJCon RepID=L8TP02_9MICC
Diguanylate cyclase {ECO:0000313|EMBL:KIC69260.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
PLM3_127_b2_sep16_scaffold_25_32
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35517..36470)
DNA (954bp) protein (318aa)
hypothetical protein Tax=Streptomyces sulphureus RepID=UPI00035CDFC0
Aldo/keto reductase {ECO:0000313|EMBL:KJK58033.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
aldo/keto reductase family oxidoreductase
PLM3_127_b2_sep16_scaffold_25_33
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(36564..38345)
DNA (1782bp) protein (594aa)
cap:CLDAP_15630 proS; prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
prolyl-tRNA synthetase
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_127_b2_sep16_scaffold_25_34
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(38509..38781)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXN8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH83085.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_25_35
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(38784..39536)
DNA (753bp) protein (251aa)
Oxidoreductase FAD/NAD(P)-binding domain protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBC3_9CHLR
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:EFH87907.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
PLM3_127_b2_sep16_scaffold_25_36
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(39506..40123)
DNA (618bp) protein (206aa)
Oxidoreductase molybdopterin binding protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBI7_CONWI
oxidoreductase molybdopterin binding protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ADB49356.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_127_b2_sep16_scaffold_25_37
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(40120..41751)
DNA (1632bp) protein (544aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Glucose-6-phosphate isomerase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I998_CALAS
pgi; glucose-6-phosphate isomerase
PLM3_127_b2_sep16_scaffold_25_38
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41832..42923)
DNA (1092bp) protein (364aa)
transposase IS605 Tax=Catelliglobosispora koreensis RepID=UPI000365CF33
transposase
Transposase {ECO:0000313|EMBL:ABD12784.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM3_127_b2_sep16_scaffold_25_39
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42953..43801)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003643382
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ89084.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_127_b2_sep16_scaffold_25_40
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43812..44171)
DNA (360bp) protein (120aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003781860
Uncharacterized protein {ECO:0000313|EMBL:KDA40557.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_25_41
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44356..44574)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Saccharomonospora marina XMU15 RepID=H5X9S1_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR51511.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_25_42
unknown

Not on your lists

45981..46394
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_25_43
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47197..47454
DNA (258bp) protein (86aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000369E722
Uncharacterized protein {ECO:0000313|EMBL:EFC81496.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
transposase
PLM3_127_b2_sep16_scaffold_25_44
unknown

Not on your lists

comp(47811..48638)
DNA (828bp) protein (276aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_25_45
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49290..50060
DNA (771bp) protein (257aa)
Rhodanese domain protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ABH1_THECD
Rhodanese domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_25_46
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50162..51109)
DNA (948bp) protein (316aa)
Galactose mutarotase-like enzyme Tax=Mycobacterium smegmatis JS623 RepID=L0IRL0_MYCSM
Galactose mutarotase {ECO:0000313|EMBL:CDO86664.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
galactose mutarotase-like enzyme
PLM3_127_b2_sep16_scaffold_25_47
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51262..53205)
DNA (1944bp) protein (648aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003778459
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG03605.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_127_b2_sep16_scaffold_25_48
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(53333..54199)
DNA (867bp) protein (289aa)
hypothetical protein Tax=actinobacterium SCGC AAA015-M09 RepID=UPI000364BE07
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_25_49
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54312..55988)
DNA (1677bp) protein (559aa)
Putative acetolactate synthase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AZ24_STRRD
acetolactate synthase
Putative acetolactate synthase {ECO:0000313|EMBL:ACZ90961.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_127_b2_sep16_scaffold_25_50
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56406..57071
DNA (666bp) protein (222aa)
Tax=RBG_16_Desulfobacca_60_12_curated
PLM3_127_b2_sep16_scaffold_25_51
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57607..58791
DNA (1185bp) protein (395aa)
Uncharacterized protein Tax=Saccharomonospora marina XMU15 RepID=H5WXU9_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR51758.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
Hypothetical protein
PLM3_127_b2_sep16_scaffold_25_52
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

59026..60654
DNA (1629bp) protein (543aa)
oxidoreductase Tax=Micromonospora sp. CNB394 RepID=UPI000365E02A
Sulfite oxidase-like oxidoreductase, molybdopterin-binding subunit
Tax=BJP_IG2069_Chloroflexi_70_12
PLM3_127_b2_sep16_scaffold_25_53
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60670..63705
DNA (3036bp) protein (1012aa)
Transcriptional regulator, LuxR family Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8D7_GEOOG
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB73559.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_127_b2_sep16_scaffold_25_54
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64284..64613)
DNA (330bp) protein (110aa)
ErfK/YbiS/YcfS/YnhG family protein (Fragment) Tax=Frankia sp. EUN1f RepID=D3D7S4_9ACTO
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EFC82906.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_25_55
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(65288..65758)
DNA (471bp) protein (157aa)
FMN-binding pyridoxamine 5'-phosphate oxidase-like protein bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_127_b2_sep16_scaffold_25_56
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

65907..66695
DNA (789bp) protein (263aa)
Carboxymethylenebutenolidase (EC:3.1.1.45)
Dienelactone hydrolase Tax=Rhodococcus opacus RepID=Q8G9L2_RHOOP
Dienelactone hydrolase family protein {ECO:0000313|EMBL:KJF24633.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
PLM3_127_b2_sep16_scaffold_25_57
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66874..67317
DNA (444bp) protein (148aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SAA4_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV85219.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_127_b2_sep16_scaffold_25_58
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

67640..68686
DNA (1047bp) protein (349aa)
Alcohol dehydrogenase GroES-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARJ5_RUBXD
alcohol dehydrogenase GroES-like protein
Alcohol dehydrogenase GroES-like protein {ECO:0000313|EMBL:ABG05983.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_127_b2_sep16_scaffold_25_59
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68822..69037
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Streptomyces turgidiscabies Car8 RepID=L7EV11_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KIA64043.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_25_60
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69028..69465
DNA (438bp) protein (146aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
hypothetical protein Tax=Nocardiopsis halophila RepID=UPI000345B3A8
hypothetical protein
Displaying items 31-60 of 111 in total

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