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PLM3_127_b2_sep16_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_31_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_31_2
unknown

Not on your lists

215..364
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_31_3
unknown

Not on your lists

813..974
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_31_4
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1041..2600
DNA (1560bp) protein (520aa)
Resolvase, N-terminal domain protein Tax=Streptomyces turgidiscabies Car8 RepID=L7F1J5_9ACTO
Recombinase {ECO:0000313|EMBL:KJS53496.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
putative recombinase
PLM3_127_b2_sep16_scaffold_31_5
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3053..3427)
DNA (375bp) protein (125aa)
protein tyrosine phosphatase (EC:3.1.3.2)
Protein tyrosine phosphatase Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JV06_BURCC
Uncharacterized protein {ECO:0000313|EMBL:KJS52581.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
PLM3_127_b2_sep16_scaffold_31_6
unknown

Not on your lists

3843..4076
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_31_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4109..4390)
DNA (282bp) protein (94aa)
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:EFH82103.1}; EC=3.2.1.3 {ECO:0000313|EMBL:EFH82103.1};; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Glucan 1,4-alpha-glucosidase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZW3_9CHLR
glucan 1,4-alpha-glucosidase
PLM3_127_b2_sep16_scaffold_31_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4794..5042)
DNA (249bp) protein (83aa)
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:EFH82103.1}; EC=3.2.1.3 {ECO:0000313|EMBL:EFH82103.1};; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Glucan 1,4-alpha-glucosidase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZW3_9CHLR
PLM3_127_b2_sep16_scaffold_31_9
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5478..5858
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q2H0_KRIFD
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADB35866.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_127_b2_sep16_scaffold_31_10
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6224..7897
DNA (1674bp) protein (558aa)
cell envelope-related transcriptional attenuator bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
cell envelope-related transcriptional attenuator
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3_127_b2_sep16_scaffold_31_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8195..9823
DNA (1629bp) protein (543aa)
Metallophosphoesterase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A9K8_THECD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACY98694.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_31_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9783..11660
DNA (1878bp) protein (626aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00037BE7D1
WD40 repeat-containing protein
WD40 repeat, subgroup {ECO:0000313|EMBL:ADL46895.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM3_127_b2_sep16_scaffold_31_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11835..15203)
DNA (3369bp) protein (1123aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
uvrD; ATP-dependent DNA helicase (EC:3.6.1.-)
ATPase AAA Tax=Frankia sp. BMG5.12 RepID=UPI00036F692F
PLM3_127_b2_sep16_scaffold_31_14
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15414..17321
DNA (1908bp) protein (636aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034B9630
tyrosine protein kinase:Serine/threonine protein kinase
Tyrosine protein kinase:Serine/threonine protein kinase {ECO:0000313|EMBL:AAZ56262.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM3_127_b2_sep16_scaffold_31_15
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17365..18204)
DNA (840bp) protein (280aa)
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily Tax=Frankia sp. QA3 RepID=I8QZ55_9ACTO
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily {ECO:0000313|EMBL:EIV95779.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
PLM3_127_b2_sep16_scaffold_31_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

18618..21455
DNA (2838bp) protein (946aa)
Diguanylate cyclase/phosphodiesterase bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Cellulose synthesis regulatory protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_127_b2_sep16_scaffold_31_17
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21654..23192
DNA (1539bp) protein (513aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VXJ3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB91645.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
diacylglycerol kinase catalytic subunit
PLM3_127_b2_sep16_scaffold_31_18
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23623..25473
DNA (1851bp) protein (617aa)
regulator Tax=Streptomyces sp. SS RepID=UPI0002D952DF
SARP family transcriptional regulator
Transcriptional regulator, SARP family protein {ECO:0000313|EMBL:ADI04172.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM3_127_b2_sep16_scaffold_31_19
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25460..26491
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Nocardia asteroides NBRC 15531 RepID=U5E5Z8_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:GAD85267.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_31_20
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26738..27448
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Nocardia asteroides NBRC 15531 RepID=U5E5Z8_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:GAD85267.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_31_21
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

27504..28592
DNA (1089bp) protein (363aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GG20_9BACT bin=RBG9 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG9 organism_group=Chloroflexi
protein of unknown function DUF1006
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_127_b2_sep16_scaffold_31_22
unknown

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comp(28600..28707)
DNA (108bp) protein (36aa)
PLM3_127_b2_sep16_scaffold_31_23
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(28725..30167)
DNA (1443bp) protein (481aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] bin=bin9_gal15 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
methylmalonate-semialdehyde dehydrogenase
Tax=CSP1_3_Armatimonadetes
PLM3_127_b2_sep16_scaffold_31_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(30239..31624)
DNA (1386bp) protein (462aa)
phenylhydantoinase (EC:3.5.2.2)
Phenylhydantoinase bin=GWC2_Chloroflexi_73_18 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_127_b2_sep16_scaffold_31_25
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31803..33128)
DNA (1326bp) protein (442aa)
Aminotransferase class III Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K0C9_SACES
Aminotransferase class III {ECO:0000313|EMBL:KEI43987.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
Aminotransferase class III
PLM3_127_b2_sep16_scaffold_31_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(33125..33970)
DNA (846bp) protein (282aa)
beta-alanine synthase (EC:3.5.1.6)
apolipoprotein acyltransferase Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00030323C2
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_31_27
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(34013..35035)
DNA (1023bp) protein (341aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBN9_9CHLR
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_31_28
unknown

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comp(35047..35220)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_31_29
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

35551..37884
DNA (2334bp) protein (778aa)
Low temperature requirement A Tax=Gloeocapsa sp. PCC 7428 RepID=K9XCQ8_9CHRO
low temperature requirement A
Low temperature requirement A {ECO:0000313|EMBL:AFZ30283.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
PLM3_127_b2_sep16_scaffold_31_30
unknown

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comp(37961..38455)
DNA (495bp) protein (165aa)

This feature has no annotations

Displaying items 1-30 of 114 in total

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