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PLM3_127_b2_sep16_scaffold_80

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_80_1
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..143
DNA (141bp) protein (47aa)
Uncharacterized protein Tax=Streptomyces viridochromogenes Tue57 RepID=L8P3I5_STRVR
Uncharacterized protein {ECO:0000313|EMBL:ELS50719.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_80_2
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

457..930
DNA (474bp) protein (158aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI0003693435
MmpL domain-containing protein
MmpL domain-containing protein {ECO:0000313|EMBL:ADP80208.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_127_b2_sep16_scaffold_80_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(970..1959)
DNA (990bp) protein (330aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI000373B80F
NLP/P60 protein {ECO:0000313|EMBL:AEA23466.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
NLP/P60 protein
PLM3_127_b2_sep16_scaffold_80_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2423..3586
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZQ8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27734.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_127_b2_sep16_scaffold_80_5
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3666..3983
DNA (318bp) protein (106aa)
Putative uncharacterized protein Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M273_ACIFD
Uncharacterized protein {ECO:0000313|EMBL:KJF17930.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_80_6
unknown

Not on your lists

4080..4916
DNA (837bp) protein (279aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_80_7
Streptomyces sp. W007, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4900..6339
DNA (1440bp) protein (480aa)
Integral membrane protein Tax=Streptomyces davawensis JCM 4913 RepID=K4R8W3_9ACTO
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:EHM30800.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. W007.;"
PLM3_127_b2_sep16_scaffold_80_8
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6332..7831
DNA (1500bp) protein (500aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3D6K1_9ACTO
integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EFC81480.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
PLM3_127_b2_sep16_scaffold_80_9
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7828..9123
DNA (1296bp) protein (432aa)
ATP-binding protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R8A5_STRVP
ATP-binding protein {ECO:0000313|EMBL:KGN40829.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
ATP-binding protein
PLM3_127_b2_sep16_scaffold_80_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9120..10895
DNA (1776bp) protein (592aa)
TRAG protein Tax=Patulibacter medicamentivorans RepID=H0E9C3_9ACTN
TRAG protein {ECO:0000313|EMBL:EHN09733.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Type IV secretory pathway VirD4 protein-like protein
PLM3_127_b2_sep16_scaffold_80_11
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11033..12133)
DNA (1101bp) protein (367aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4YYI4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGA12224.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_80_12
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12130..13530)
DNA (1401bp) protein (467aa)
malate dehydrogenase (EC:1.1.1.38)
Malic enzyme Tax=Saccharomonospora cyanea NA-134 RepID=H5XF52_9PSEU
Malic enzyme {ECO:0000313|EMBL:EHR61462.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
PLM3_127_b2_sep16_scaffold_80_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13655..14560
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUB8_RUBXD
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM3_127_b2_sep16_scaffold_80_14
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14809..16116
DNA (1308bp) protein (436aa)
Isocitrate lyase {ECO:0000313|EMBL:EKP95339.1}; EC=4.1.3.1 {ECO:0000313|EMBL:EKP95339.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2R7_9FIRM
PLM3_127_b2_sep16_scaffold_80_15
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16257..17642
DNA (1386bp) protein (462aa)
glycoside hydrolase Tax=Salinispora arenicola RepID=UPI000368169C
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ABW00279.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM3_127_b2_sep16_scaffold_80_16
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

17747..19780
DNA (2034bp) protein (678aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037EAD0A
threonyl-tRNA synthetase
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_127_b2_sep16_scaffold_80_17
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

19810..20274
DNA (465bp) protein (155aa)
hypothetical protein, partial Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00035F10D1
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:AER67582.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
PLM3_127_b2_sep16_scaffold_80_18
Fukomys damarensis, Fukomys, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(20367..21899)
DNA (1533bp) protein (511aa)
PREDICTED: uncharacterized protein LOC100882977 Tax=Megachile rotundata RepID=UPI000258D3F2
Collagen alpha-1(I) chain {ECO:0000313|EMBL:KFO34958.1}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricognathi; Bathyergidae; Fukomys.;" source="Fukomys damarensis (Damaraland mole rat) (Cryptomys damarensis).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_80_19
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22066..24699
DNA (2634bp) protein (878aa)
Polysaccharide biosynthesis protein Tax=Actinoplanes sp. N902-109 RepID=R4LCM2_9ACTO
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AGL17162.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM3_127_b2_sep16_scaffold_80_20
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24871..25560)
DNA (690bp) protein (230aa)
Two component transcriptional regulator, LuxR family Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WEN4_KINRD
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABS05273.1}; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
PLM3_127_b2_sep16_scaffold_80_21
Poecilia formosa, Poecilia, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(25996..27192)
DNA (1197bp) protein (399aa)
Uncharacterized protein Tax=Eimeria praecox RepID=U6GF69_9EIME
N-acetylglucosaminyl phosphatidylinositol deacetylase
Uncharacterized protein {ECO:0000313|Ensembl:ENSPFOP00000021471}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia.;" source="Poecilia formosa (Amazon molly) (Limia formosa).;"
PLM3_127_b2_sep16_scaffold_80_22
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27516..28337)
DNA (822bp) protein (274aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003826C7A
Sugar transferase {ECO:0000313|EMBL:EWT01723.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
Sugar transferases involved in lipopolysaccharide synthesis
PLM3_127_b2_sep16_scaffold_80_23
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28352..29872)
DNA (1521bp) protein (507aa)
Putative polysaccharide biosynthesis protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NFY5_KITSK
putative polysaccharide biosynthesis protein
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:BAJ30415.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM3_127_b2_sep16_scaffold_80_24
unknown

Not on your lists

comp(30364..31680)
DNA (1317bp) protein (439aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036DD92E
PLM3_127_b2_sep16_scaffold_80_25
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(31703..32680)
DNA (978bp) protein (326aa)
nucleotide sugar epimerase Tax=Geitlerinema sp. PCC 7105 RepID=UPI000362A340
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_80_26
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(33024..34811)
DNA (1788bp) protein (596aa)
hypothetical protein Tax=Curtobacterium ginsengisoli RepID=UPI0003B6645D
tyrosine-protein kinase
Tax=BJP_08E140C01_Anaerolineales_40_8
PLM3_127_b2_sep16_scaffold_80_27
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34852..35502)
DNA (651bp) protein (217aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MCL8_9ACTO
bacterial regulatory s, luxR family protein
Putative NarL family two-component response regulator {ECO:0000313|EMBL:BAH32493.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NBRC 100887).;"
PLM3_127_b2_sep16_scaffold_80_28
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35852..37432)
DNA (1581bp) protein (527aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037F4E42
Uncharacterized protein {ECO:0000313|EMBL:EWT01722.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
Rieske (2Fe-2S) domain-containing protein
PLM3_127_b2_sep16_scaffold_80_29
unknown

Not on your lists

37818..37913
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_80_30
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38284..40044)
DNA (1761bp) protein (587aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V0J6_9ACTO
Homeo-like domain protein {ECO:0000313|EMBL:EUA06118.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
Displaying items 1-30 of 60 in total

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