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PLM3_127_b2_sep16_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_138_1
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2..133)
DNA (132bp) protein (44aa)
Transposase IS116/IS110/IS902 family protein Tax=mine drainage metagenome RepID=T1B9Z4_9ZZZZ
Transposase {ECO:0000313|EMBL:KJE75323.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
PLM3_127_b2_sep16_scaffold_138_2
unknown

Not on your lists

560..679
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_138_3
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

637..1263
DNA (627bp) protein (209aa)
Uridine kinase Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KM04_CLOPH
Uridine kinase {ECO:0000313|EMBL:KJE23599.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
uridine kinase
PLM3_127_b2_sep16_scaffold_138_4
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1312..2136
DNA (825bp) protein (275aa)
Phenazine biosynthesis PhzC/PhzF protein Tax=Aeromonas media WS RepID=K2I6V4_AERME
PhzF family phenazine biosynthesis protein {ECO:0000313|EMBL:AHE48442.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila 4AK4.;"
phenazine biosynthesis PhzC/PhzF protein
PLM3_127_b2_sep16_scaffold_138_5

Not on your lists

2133..2891
DNA (759bp) protein (253aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI0003667359
Uncharacterized protein {ECO:0000313|EMBL:KGA15040.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
PLM3_127_b2_sep16_scaffold_138_6
unknown

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2851..3552
DNA (702bp) protein (234aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_138_7
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4261..5466)
DNA (1206bp) protein (402aa)
Putative DNA-binding protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GXG2_ACTM4
putative DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:BAL85449.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_127_b2_sep16_scaffold_138_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5876..6511)
DNA (636bp) protein (212aa)
Amino acid-binding ACT Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV43_RUBXD
amino acid-binding protein
Amino acid-binding ACT {ECO:0000313|EMBL:ABG04735.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_127_b2_sep16_scaffold_138_9
Streptomyces sp. NRRL B-1568, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6681..7058)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Streptomyces sp. CNT302 RepID=UPI00036C0CEB
dGTPase {ECO:0000313|EMBL:KJY43044.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL B-1568.;"
DifB protein
PLM3_127_b2_sep16_scaffold_138_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(7124..8164)
DNA (1041bp) protein (347aa)
Luciferase-like, subgroup Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TV21_9CHLR
Luciferase-like, subgroup {ECO:0000313|EMBL:EFH84121.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
luciferase-like protein
PLM3_127_b2_sep16_scaffold_138_11
unknown

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comp(8189..8833)
DNA (645bp) protein (215aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_138_12
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9004..9600
DNA (597bp) protein (199aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI00037EAE0B
Plastocyanin {ECO:0000313|EMBL:KJE19623.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
40-residue YVTN family beta-propeller repeat-containing protein
PLM3_127_b2_sep16_scaffold_138_13
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9617..10156)
DNA (540bp) protein (180aa)
Putative ABC transporter ATP-binding protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5Z1I2_NOCFA
ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAD55709.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM3_127_b2_sep16_scaffold_138_14
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10350..12758
DNA (2409bp) protein (803aa)
3-hydroxyacyl-CoA dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUC6_RUBXD
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain {ECO:0000313|EMBL:AHY47122.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_127_b2_sep16_scaffold_138_15
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

12918..14102
DNA (1185bp) protein (395aa)
3-ketoacyl-CoA thiolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUC7_RUBXD
AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase
AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:AHY47121.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_127_b2_sep16_scaffold_138_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(14139..14603)
DNA (465bp) protein (155aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002629081
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_138_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14633..14854)
DNA (222bp) protein (74aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7N3_ALIDK
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:AEB86630.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
PLM3_127_b2_sep16_scaffold_138_18
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15015..15860)
DNA (846bp) protein (282aa)
Helix-turn-helix domain protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F952_VERMA
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEB42080.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM3_127_b2_sep16_scaffold_138_19
unknown

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16027..16317
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_138_20
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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comp(16450..16644)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y306_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG86967.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_127_b2_sep16_scaffold_138_21
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(16841..17980)
DNA (1140bp) protein (380aa)
Uncharacterized protein Tax=Rhodococcus opacus (strain B4) RepID=C1BDH8_RHOOB
hypothetical protein
Tax=BJP_IG2102_Elusimicrobia_52_42
PLM3_127_b2_sep16_scaffold_138_22
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18158..20377)
DNA (2220bp) protein (740aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00037752B3
glgB; 1,4-alpha-glucan branching enzyme
PLM3_127_b2_sep16_scaffold_138_23
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20384..21856)
DNA (1473bp) protein (491aa)
Aminoglycoside phosphotransferase Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NT75_STRVO
Maltokinase {ECO:0000313|EMBL:KKA42946.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
aminoglycoside phosphotransferase
PLM3_127_b2_sep16_scaffold_138_24
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21863..23800)
DNA (1938bp) protein (646aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B565_FRADG
alpha amylase
PLM3_127_b2_sep16_scaffold_138_25
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24010..26547
DNA (2538bp) protein (846aa)
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Phosphorylase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ABU4_THECD
PLM3_127_b2_sep16_scaffold_138_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(26565..27149)
DNA (585bp) protein (195aa)
ypeA; Acetyltransferase (EC:2.3.1.-)
Acetyltransferase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SD26_ACTS5
Tax=RBG_16_Archaea_50_20_curated
PLM3_127_b2_sep16_scaffold_138_27
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27189..29444)
DNA (2256bp) protein (752aa)
Putative uncharacterized protein Tax=Saccharomonospora cyanea NA-134 RepID=H5XMW2_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHR62087.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
glucosyl hydrolase family protein
PLM3_127_b2_sep16_scaffold_138_28
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29688..30032)
DNA (345bp) protein (115aa)
ClpX-like protein Tax=Paenibacillus larvae RepID=UPI00016955B1
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25719.;"
PLM3_127_b2_sep16_scaffold_138_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(30295..30987)
DNA (693bp) protein (231aa)
Transcriptional regulator, TetR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0B3_CONWI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB51973.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_127_b2_sep16_scaffold_138_30
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30984..31307)
DNA (324bp) protein (108aa)
Multidrug resistance protein EbrA Tax=Bhargavaea cecembensis DSE10 RepID=M7NAG3_9BACL
Multidrug resistance protein EbrA {ECO:0000313|EMBL:EMR05588.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis DSE10.;"
small multidrug resistance protein
Displaying items 1-30 of 57 in total

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