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PLM3_127_b2_sep16_scaffold_285

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_285_1
unknown

Not on your lists

3..956
DNA (954bp) protein (318aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_285_2
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1134..1874
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWH3_FRADG
Uncharacterized protein {ECO:0000313|EMBL:KGM14453.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_285_3
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1867..3738
DNA (1872bp) protein (624aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein Tax=Nocardiopsis baichengensis RepID=UPI0003640740
cas1; CRISPR-associated protein Cas1
PLM3_127_b2_sep16_scaffold_285_4
Synechocystis sp. PCC 6714, Synechocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3763..4044
DNA (282bp) protein (94aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis.;" source="Synechocystis sp. (strain PCC 6714) (Aphanocapsa sp. (strain PCC; 6714)).;"
hypothetical protein Tax=Nocardiopsis baichengensis RepID=UPI000349D1DE
CRISPR-associated protein Cas2
PLM3_127_b2_sep16_scaffold_285_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5106..5930)
DNA (825bp) protein (275aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037580D3
Uncharacterized protein {ECO:0000313|EMBL:ETK36760.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_285_6
unknown

Not on your lists

comp(5927..6094)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_285_7
unknown

Not on your lists

6268..7518
DNA (1251bp) protein (417aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_285_8
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7716..8408
DNA (693bp) protein (231aa)
TDP-glucose-4,6-dehydratase Tax=Deinococcus apachensis RepID=UPI000379529C
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABF43851.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
PLM3_127_b2_sep16_scaffold_285_9
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8558..9973)
DNA (1416bp) protein (472aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036BB1E4
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:KIF03067.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
pyridoxal-dependent decarboxylase
PLM3_127_b2_sep16_scaffold_285_10
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10464..12101
DNA (1638bp) protein (546aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AF01_THECD
delta-1-pyrroline-5-carboxylate dehydrogenase
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ACY99545.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_285_11
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12411..13730
DNA (1320bp) protein (440aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVG4_9ACTN
putative major facilitator superfamily transporter
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_127_b2_sep16_scaffold_285_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(13862..14140)
DNA (279bp) protein (93aa)
Transposase bin=GWC2_Chloroflexi_73_18 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
transposase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_127_b2_sep16_scaffold_285_13
unknown

Not on your lists

14530..15309
DNA (780bp) protein (260aa)
Carbamoyltransferase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WEK2_ACTMD
Uncharacterized protein {ECO:0000313|EMBL:CPR16424.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
carbamoyltransferase
PLM3_127_b2_sep16_scaffold_285_14
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15327..15800
DNA (474bp) protein (158aa)
NUDIX hydrolase Tax=Methylobacterium sp. GXF4 RepID=I9CNE4_9RHIZ
NUDIX hydrolase {ECO:0000313|EMBL:EIZ85020.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
NUDIX hydrolase
PLM3_127_b2_sep16_scaffold_285_15
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15937..17679)
DNA (1743bp) protein (581aa)
Putative uncharacterized protein Tax=Frankia sp. (strain CcI3) RepID=Q2JGY5_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD09457.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM3_127_b2_sep16_scaffold_285_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17824..19890)
DNA (2067bp) protein (689aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FB06_VERMA
Uncharacterized protein {ECO:0000313|EMBL:ETK31356.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_285_17
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19918..20478)
DNA (561bp) protein (187aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A0B3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:ETK31357.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_285_18
unknown

Not on your lists

comp(20701..21102)
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_285_19
Vibrio caribbeanicus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22281..22571)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Vibrio caribbenthicus ATCC BAA-2122 RepID=E3BP68_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:EFP95200.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio caribbeanicus ATCC BAA-2122.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_285_20
Pseudomonas sp. GM17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22580..23896)
DNA (1317bp) protein (439aa)
Putative hemagglutinin (DUF637) (Fragment) Tax=Pseudomonas sp. GM17 RepID=J3E3P8_9PSED
Putative hemagglutinin (DUF637) {ECO:0000313|EMBL:EJM04477.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_285_21
unknown

Not on your lists

comp(23897..24193)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_285_22
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24472..28443)
DNA (3972bp) protein (1324aa)
DNA helicase Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SC65_INTC7
DNA helicase
DNA helicase {ECO:0000313|EMBL:ADU47409.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM3_127_b2_sep16_scaffold_285_23
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28539..29489)
DNA (951bp) protein (317aa)
Aldo/keto reductase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AW28_FRADG
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AEH11350.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_127_b2_sep16_scaffold_285_24
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29724..31784)
DNA (2061bp) protein (687aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase {ECO:0000313|EMBL:ACY96921.1}; EC=3.4.21.26 {ECO:0000313|EMBL:ACY96921.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
peptidase S9 Tax=Actinomadura atramentaria RepID=UPI0003611906
PLM3_127_b2_sep16_scaffold_285_25
unknown

Not on your lists

31889..32629
DNA (741bp) protein (247aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_285_26
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32751..33779)
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037C6BBF
Alcohol dehydrogenase {ECO:0000313|EMBL:EOD63907.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
adh; alcohol dehydrogenase
PLM3_127_b2_sep16_scaffold_285_27
unknown

Not on your lists

comp(33822..34670)
DNA (849bp) protein (283aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_285_28
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(34750..35211)
DNA (462bp) protein (154aa)
DUF59 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL9_NITGG
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
PLM3_127_b2_sep16_scaffold_285_29
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35208..36278)
DNA (1071bp) protein (357aa)
Putative amidohydrolase Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IYB1_ACIMA
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:BAJ80771.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
PLM3_127_b2_sep16_scaffold_285_30
unknown

Not on your lists

comp(36733..37569)
DNA (837bp) protein (279aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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