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PLM3_127_b2_sep16_scaffold_474

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_474_1
Planomicrobium glaciei, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..156)
DNA (156bp) protein (52aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium glaciei CHR43.;"
Cyclic pyranopterin monophosphate synthase Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8UBI6_DEIML
molybdenum cofactor biosynthesis protein A
PLM3_127_b2_sep16_scaffold_474_2
unknown

Not on your lists

comp(465..836)
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_474_3
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(856..1707)
DNA (852bp) protein (284aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00035FA117
Regulatory protein TetR {ECO:0000313|EMBL:CDR06320.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_474_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1871..2398
DNA (528bp) protein (176aa)
Heat shock protein Hsp20 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
heat shock protein Hsp20
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_474_5
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2873..3631
DNA (759bp) protein (253aa)
Band 7 domain-containing protein Tax=Rhodococcus sp. AW25M09 RepID=L8DA98_9NOCA
Band 7 domain-containing protein {ECO:0000313|EMBL:KHD77788.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_474_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5166..5591)
DNA (426bp) protein (142aa)
hypothetical protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI0003646386
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:AHG89836.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_474_7
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5619..6074)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00030836AA
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:AIA30312.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum YSK.;"
PLM3_127_b2_sep16_scaffold_474_8
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(6145..6489)
DNA (345bp) protein (115aa)
TPR repeat-containing protein Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S9P4_PROA2
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
PLM3_127_b2_sep16_scaffold_474_9
unknown

Not on your lists

comp(6591..7355)
DNA (765bp) protein (255aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_474_10
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7598..9184
DNA (1587bp) protein (529aa)
Putative peptidase Tax=planctomycete KSU-1 RepID=I3IKY2_9PLAN
Putative peptidase {ECO:0000313|EMBL:GAB62377.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
peptidase S8/S53 subtilisin kexin sedolisin
PLM3_127_b2_sep16_scaffold_474_11
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9200..10531
DNA (1332bp) protein (444aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IKY3_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62378.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_474_12
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10936..11511)
DNA (576bp) protein (192aa)
Putative membrane protein Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W8N0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY30961.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
membrane protein
PLM3_127_b2_sep16_scaffold_474_13
Streptomyces tubercidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11979..12989)
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI000377DD30
O-methyltransferase {ECO:0000313|EMBL:AAT45282.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tubercidicus.;"
methyltransferase/methylase
PLM3_127_b2_sep16_scaffold_474_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13539..14858)
DNA (1320bp) protein (440aa)
hypothetical protein Tax=Spirulina subsalsa RepID=UPI0002E498CC
Methyltransferase domain {ECO:0000313|EMBL:CDM65838.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methyltransferase
PLM3_127_b2_sep16_scaffold_474_15
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15050..17323)
DNA (2274bp) protein (758aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
helicase Tax=Salinispora pacifica RepID=UPI00037CE5E9
exodeoxyribonuclease V
PLM3_127_b2_sep16_scaffold_474_16
unknown

Not on your lists

comp(17637..18482)
DNA (846bp) protein (282aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_474_17
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18785..19051
DNA (267bp) protein (89aa)
FHA domain-containing protein Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BE99_MYCCN
FHA domain-containing protein
FHA domain-containing protein {ECO:0000313|EMBL:AFM15606.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM3_127_b2_sep16_scaffold_474_18
unknown

Not on your lists

comp(19122..19277)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_474_19
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19338..20390)
DNA (1053bp) protein (351aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00037599D5
MFS transporter
MFS transporter {ECO:0000313|EMBL:AJF69535.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM3_127_b2_sep16_scaffold_474_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

20801..21808
DNA (1008bp) protein (336aa)
NUDIX hydrolase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDS4_RHOM4
putative phosphohistidine phosphatase SixA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_127_b2_sep16_scaffold_474_21
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21861..22550)
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Streptomyces afghaniensis 772 RepID=S4MCR4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ34176.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_474_22
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22547..22846)
DNA (300bp) protein (100aa)
membrane protein Tax=Streptomyces sp. CNS615 RepID=UPI000360FE5B
permease
Putative membrane protein {ECO:0000313|EMBL:ELP71301.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
PLM3_127_b2_sep16_scaffold_474_23
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

23351..24886
DNA (1536bp) protein (512aa)
5'-nucleotidase; K01081 5'-nucleotidase [EC:3.1.3.5] bin=bin8_Chloro species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
5'-nucleotidase (EC:3.1.3.5)
Tax=CSP1_4_Chloroflexi
PLM3_127_b2_sep16_scaffold_474_24
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25054..26211)
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036E60FC
Uncharacterized protein {ECO:0000313|EMBL:KEQ27801.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_474_25
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26287..26619
DNA (333bp) protein (111aa)
Putative transcriptional regulator Tax=Saccharomonospora glauca K62 RepID=I1D768_9PSEU
Putative transcriptional regulator {ECO:0000313|EMBL:EIF00793.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
MerR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_474_26
Gordonia sp. KTR9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26625..28004
DNA (1380bp) protein (460aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MWP9_9ACTO
protein-tyrosine phosphatase, low molecular weight
Protein-tyrosine phosphatase {ECO:0000313|EMBL:AFR51457.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. KTR9.;"
PLM3_127_b2_sep16_scaffold_474_27
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28091..28726
DNA (636bp) protein (212aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI000363D889
arsC; arsenate reductase
Heat-shock protein HtpX {ECO:0000313|EMBL:EQM29954.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis DN1.;"
PLM3_127_b2_sep16_scaffold_474_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28771..29346)
DNA (576bp) protein (192aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003694F0A
Uncharacterized protein {ECO:0000313|EMBL:EXG82475.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM3_127_b2_sep16_scaffold_474_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29328..29672)
DNA (345bp) protein (115aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036E8F22
Putative transcriptional regulator {ECO:0000313|EMBL:EXG82474.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PadR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_474_30
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29752..30786
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003639597
Daunorubicin resistance ABC transporter ATP-binding subunit {ECO:0000313|EMBL:EXG82473.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ABC transporter ATP-binding protein
Displaying items 1-30 of 56 in total

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