name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_487_1
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
1..138
|
Elongation factor Tu Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EHW1_AMYSD
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
|
|
PLM3_127_b2_sep16_scaffold_487_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
267..431
|
50S ribosomal protein L33 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2I7_CATAD
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
|
|
PLM3_127_b2_sep16_scaffold_487_3
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
590..1036
|
UPF0336 protein SACE_6876 Tax=Saccharopolyspora erythraea RepID=Y6876_SACEN
UPF0336 protein IN07_05750 {ECO:0000256|HAMAP-Rule:MF_00799}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
|
|
PLM3_127_b2_sep16_scaffold_487_4
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
1033..1446
|
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI000372DBDE
Dehydratase {ECO:0000313|EMBL:KGH47620.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
MaoC domain-containing protein dehydratase
|
|
PLM3_127_b2_sep16_scaffold_487_5
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria
|
Not on your lists |
1449..2381
|
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIB0_THET1
Tax=RBG_16_Chloroflexi_68_14_curated
|
|
PLM3_127_b2_sep16_scaffold_487_6
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
2441..3037
|
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z2T0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65234.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
RNA polymerase ECF-type sigma factor
|
|
PLM3_127_b2_sep16_scaffold_487_7
unknown
|
Not on your lists |
3034..3453
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_487_trna_1
unknown
|
Not on your lists |
3444..3523
|
transferRNA Trp
|
|
PLM3_127_b2_sep16_scaffold_487_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria
|
Not on your lists |
3595..3927
|
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI00037D4759
preprotein translocase subunit SecE
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
|
|
PLM3_127_b2_sep16_scaffold_487_9
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria
|
Not on your lists |
3965..4531
|
Transcription termination/antitermination protein NusG Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0F0_9ACTN
transcription antitermination protein nusG
Tax=RBG_13_Actinobacteria_55_18_curated
|
|
PLM3_127_b2_sep16_scaffold_487_10
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
4575..5018
|
50S ribosomal protein L11 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PAQ6_9ACTO
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
50S ribosomal protein L11
|
|
PLM3_127_b2_sep16_scaffold_487_11
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
5189..5908
|
50S ribosomal protein L1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SHB9_GEOOG
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
|
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PLM3_127_b2_sep16_scaffold_487_12
unknown
|
Not on your lists |
5923..6792
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_487_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7069..7701
|
50S ribosomal protein L10 Tax=Frankia sp. BMG5.12 RepID=UPI000367E66D
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
|
|
PLM3_127_b2_sep16_scaffold_487_14
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7716..8111
|
50S ribosomal protein L7/L12 Tax=Frankia RepID=RL7_FRAAA
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
|
|
PLM3_127_b2_sep16_scaffold_487_15
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8430..11882
|
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
DNA-directed RNA polymerase subunit beta Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AW84_FRADG
DNA-directed RNA polymerase subunit beta
|
|
PLM3_127_b2_sep16_scaffold_487_16
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11884..15891
|
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'''' Tax=Sporichthya polymorpha RepID=UPI000360837F
|
|
PLM3_127_b2_sep16_scaffold_487_17
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
16009..16731
|
GntR family transcriptional regulator Tax=Arthrobacter gangotriensis Lz1y RepID=M7MM37_9MICC
GntR family transcriptional regulator {ECO:0000313|EMBL:EMQ97387.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
GntR family transcriptional regulator
|
|
PLM3_127_b2_sep16_scaffold_487_18
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea
|
Not on your lists |
16728..17489
|
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B4A237
Uncharacterized protein {ECO:0000313|EMBL:AKB36720.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
hypothetical protein
|
|
PLM3_127_b2_sep16_scaffold_487_19
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
17555..17833
|
phosphotransferase Tax=Amycolatopsis RepID=UPI0002627E93
ptsH; phosphotransferase system, phosphocarrier protein HPr
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:AIJ24953.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
|
|
PLM3_127_b2_sep16_scaffold_487_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria
|
Not on your lists |
17946..18500
|
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tax=Paenibacillus sp. HW567 RepID=UPI0003644590
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
|
|
PLM3_127_b2_sep16_scaffold_487_21
CSP1_5_NC10, NC10, Bacteria
|
Not on your lists |
18497..19669
|
NAD-dependent epimerase/dehydratase bin=bin3_NC10 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
NAD-dependent epimerase/dehydratase
Tax=CSP1_5_NC10
|
|
PLM3_127_b2_sep16_scaffold_487_22
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria
|
Not on your lists |
19666..21375
|
FAD dependent oxidoreductase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYF7_ROSS1
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABQ91660.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
|
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PLM3_127_b2_sep16_scaffold_487_23
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria
|
Not on your lists |
21375..22625
|
anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase, anaerobic, B subunit {ECO:0000313|EMBL:ACL23023.1}; EC=1.1.5.3 {ECO:0000313|EMBL:ACL23023.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
Glycerol-3-phosphate dehydrogenase, anaerobic, B subunit Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GC49_CHLAD
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PLM3_127_b2_sep16_scaffold_487_24
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria
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Not on your lists |
22664..23887
|
4Fe-4S ferredoxin, iron-sulfur binding domain protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYF9_ROSS1
glpC; sn-glycerol-3-phosphate dehydrogenase subunit C
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABQ91662.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
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PLM3_127_b2_sep16_scaffold_487_25
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(23903..25552)
|
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00036E8B10
Uncharacterized protein {ECO:0000313|EMBL:ETK37122.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
pdc; pyruvate dehydrogenase (cytochrome)
|
|
PLM3_127_b2_sep16_scaffold_487_26 |
Not on your lists |
25679..25939
|
Putative Ribbon-helix-helix protein, copG family protein Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8I8_9ZZZZ
Marine sediment metagenome DNA, contig: S12H4_C03017 {ECO:0000313|EMBL:GAI62417.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
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PLM3_127_b2_sep16_scaffold_487_27 |
Not on your lists |
25936..26247
|
PemK-like protein; K07171 mRNA interferase [EC:3.1.-.-] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin7_NC10_sister organism_group=NC10
Marine sediment metagenome DNA, contig: S12H4_S11400 {ECO:0000313|EMBL:GAJ12435.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MazF family transcriptional regulator
|
|
PLM3_127_b2_sep16_scaffold_487_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(26269..26916)
|
Dihydroxyacetone kinase, L subunit Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPQ6_PSEUX
dihydroxyacetone kinase subunit DhaL
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:AEA25173.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
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PLM3_127_b2_sep16_scaffold_487_29
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria
|
Not on your lists |
comp(26963..28477)
|
glycerol kinase (EC:2.7.1.30) bin=bin9_gal15 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin9_gal15 organism_group=GAL15
glycerol kinase (EC:2.7.1.30)
Tax=CG_Dehalo_02
|