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PLM3_127_b2_sep16_scaffold_537

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_537_1
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..861
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Streptomyces collinus Tu 365 RepID=S5UYK3_STRCU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS72368.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
PLM3_127_b2_sep16_scaffold_537_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1588..2943
DNA (1356bp) protein (452aa)
aminotransferase Tax=Streptomyces sp. CNT302 RepID=UPI00037AF4FC
Aminotransferase {ECO:0000313|EMBL:ETK31675.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
aminotransferase
PLM3_127_b2_sep16_scaffold_537_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3107..4111)
DNA (1005bp) protein (335aa)
Phage shock protein A (IM30) suppresses sigma54-dependent transcription-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQG0_STRRD
Phage shock protein A (IM30) suppresses sigma54-dependent transcription-like protein
Phage shock protein A (IM30) suppresses sigma54-dependent transcription-like protein {ECO:0000313|EMBL:ACZ84504.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_127_b2_sep16_scaffold_537_4
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4140..4898)
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0G6Y2_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK38652.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3_127_b2_sep16_scaffold_537_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4945..6789)
DNA (1845bp) protein (615aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQG2_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ84506.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_127_b2_sep16_scaffold_537_6
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7016..8215)
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2ZI18_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EME59984.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_537_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8654..10474)
DNA (1821bp) protein (607aa)
von Willebrand factor A Tax=Amycolatopsis balhimycina RepID=UPI0003678A87
von Willebrand factor A {ECO:0000313|EMBL:ETK33588.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
von Willebrand factor type A
PLM3_127_b2_sep16_scaffold_537_8
R_NC10_66_22, NC10, Bacteria

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11082..12329
DNA (1248bp) protein (416aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI00037E83C3
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_537_9
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12277..12894)
DNA (618bp) protein (206aa)
Putative uncharacterized protein Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHX9_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG73403.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
PLM3_127_b2_sep16_scaffold_537_10
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12968..14206)
DNA (1239bp) protein (413aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJD6_THEM7
PLM3_127_b2_sep16_scaffold_537_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(14210..14470)
DNA (261bp) protein (87aa)
Acyl carrier protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=ACP_RUBXD
acyl carrier protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_127_b2_sep16_scaffold_537_12
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(14550..15377)
DNA (828bp) protein (276aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B5N8_THEAS
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACZ19329.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 /; Su883) (Selenomonas acidaminovorans).;"
PLM3_127_b2_sep16_scaffold_537_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(15374..16492)
DNA (1119bp) protein (373aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I782_9FIRM
PLM3_127_b2_sep16_scaffold_537_14
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16557..17774)
DNA (1218bp) protein (406aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A0S8_9ACTN
Malonyl CoA-acyl carrier protein transacylase {ECO:0000313|EMBL:KGA11233.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
PLM3_127_b2_sep16_scaffold_537_15
unknown

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18206..19336
DNA (1131bp) protein (377aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_537_16
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

19624..20847
DNA (1224bp) protein (408aa)
Type II secretion system protein E Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S773_GEOOG
type II secretion system protein E
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_127_b2_sep16_scaffold_537_17
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

20844..21551
DNA (708bp) protein (236aa)
Type II secretion system protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU65_PUSST
type II secretion system protein
Tax=CG_Elusi_03
PLM3_127_b2_sep16_scaffold_537_18
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

21548..22291
DNA (744bp) protein (248aa)
Putative type II secretion system protein F Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZVH9_9ACTN
gspF; putative type II secretion system protein F
Putative type II secretion system protein F {ECO:0000313|EMBL:BAN00673.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_127_b2_sep16_scaffold_537_19
unknown

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22367..22471
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_537_20
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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22509..23969
DNA (1461bp) protein (487aa)
Resolvase domain-containing protein Tax=Streptomyces auratus AGR0001 RepID=J1ZZ65_9ACTO
Resolvase domain-containing protein {ECO:0000313|EMBL:EJJ07166.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
resolvase domain-containing protein
PLM3_127_b2_sep16_scaffold_537_21
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24133..24492)
DNA (360bp) protein (120aa)
signal peptidase I Tax=Mycobacterium abscessus RepID=UPI00034CDF89
Signal peptidase I {ECO:0000313|EMBL:KGI80610.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_537_22
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24492..24830)
DNA (339bp) protein (113aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI00036032AD
Uncharacterized protein {ECO:0000313|EMBL:KID30403.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_537_23
unknown

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comp(26289..26663)
DNA (375bp) protein (125aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_537_24
unknown

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26821..27108
DNA (288bp) protein (96aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_537_25
unknown

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27200..27490
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_537_26
unknown

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27980..28774
DNA (795bp) protein (265aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_537_27
Mycobacterium phage Murucutumbu, Caudovirales, Viruses

Not on your lists

28771..29574
DNA (804bp) protein (268aa)
hypothetical protein Tax=Streptomyces sp. CNS335 RepID=UPI00037D287C
Uncharacterized protein {ECO:0000313|EMBL:AIW03027.1}; species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Mycobacterium phage Murucutumbu.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_537_28
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

29571..31637
DNA (2067bp) protein (689aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ84072.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
Displaying 28 items

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