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PLM3_127_b2_sep16_scaffold_558

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_558_1
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(1..828)
DNA (828bp) protein (276aa)
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase (EC:2.7.7.42)
Tax=CG_Arma_02
PLM3_127_b2_sep16_scaffold_558_2
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1059..1997)
DNA (939bp) protein (313aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003670DA9
Uncharacterized protein {ECO:0000313|EMBL:CDP89915.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_558_3
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2064..3380)
DNA (1317bp) protein (439aa)
glutamine synthetase Tax=Actinopolymorpha alba RepID=UPI000364D32B
glutamine synthetase, type I
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_127_b2_sep16_scaffold_558_4
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

3703..5445
DNA (1743bp) protein (581aa)
nadE; glutamine-dependent NAD+ synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
glutamine-dependent NAD(+) synthetase
Tax=RBG_16_Chloroflexi_60_22_curated
PLM3_127_b2_sep16_scaffold_558_5
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5606..6397
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Streptomyces rapamycinicus RepID=UPI0003830C6E
3-methyl-2-oxobutanoate hydroxymethyltransferase
PLM3_127_b2_sep16_scaffold_558_6
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6651..7196
DNA (546bp) protein (182aa)
hypothetical protein Tax=Microbacterium barkeri RepID=UPI00031ED2AB
Uncharacterized protein {ECO:0000313|EMBL:KGN33912.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
YceI family protein
PLM3_127_b2_sep16_scaffold_558_7
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7229..7777)
DNA (549bp) protein (183aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI0003753280
Cob(I)yrinic acid a c-diamide adenosyltransferase {ECO:0000313|EMBL:KGM11748.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
ATP--cobalamin adenosyltransferase
PLM3_127_b2_sep16_scaffold_558_8
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7774..8484)
DNA (711bp) protein (237aa)
reduced coenzyme F420:NADP oxidoreductase (EC:1.6.99.-)
Reduced coenzyme F420:NADP oxidoreductase {ECO:0000313|EMBL:AAZ55008.1}; EC=1.6.99.- {ECO:0000313|EMBL:AAZ55008.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
Reduced coenzyme F420:NADP oxidoreductase Tax=Thermobifida fusca (strain YX) RepID=Q47RA9_THEFY
PLM3_127_b2_sep16_scaffold_558_9
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8623..9633)
DNA (1011bp) protein (337aa)
Nucleotidyl transferase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UE03_ANASK
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACG74961.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM3_127_b2_sep16_scaffold_558_10
unknown

Not on your lists

comp(9638..10030)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_558_11
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(10039..10620)
DNA (582bp) protein (194aa)
hypothetical protein bin=bin9_gal15 species=Brevibacterium sp. Ap13 genus=Brevibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
PLM3_127_b2_sep16_scaffold_558_12
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11439..12065
DNA (627bp) protein (209aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000364FC4A
FxsA cytoplasmic membrane protein
Exlusion protein FxsA {ECO:0000313|EMBL:KJK13381.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
PLM3_127_b2_sep16_scaffold_558_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12169..12636)
DNA (468bp) protein (156aa)
Fructose-2,6-bisphosphatase Tax=Saccharomonospora azurea RepID=H8G7P2_9PSEU
phosphoglycerate mutase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_127_b2_sep16_scaffold_558_14
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12686..13414)
DNA (729bp) protein (243aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI00037405AA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY97249.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_558_15
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13556..14974)
DNA (1419bp) protein (473aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
prolyl-tRNA synthetase Tax=Streptomyces rapamycinicus RepID=UPI0003830E8B
prolyl-tRNA synthetase
PLM3_127_b2_sep16_scaffold_558_16
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15135..15932)
DNA (798bp) protein (266aa)
putative thioredoxin; K05838 putative thioredoxin bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
thioredoxin
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_127_b2_sep16_scaffold_558_17
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(15976..16470)
DNA (495bp) protein (165aa)
hypothetical protein bin=bin8_Chloro species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
PLM3_127_b2_sep16_scaffold_558_18
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16467..17432)
DNA (966bp) protein (322aa)
Fumarylacetoacetate (FAA) hydrolase Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NUH2_STRVO
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:AEM84350.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM3_127_b2_sep16_scaffold_558_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(17644..18060)
DNA (417bp) protein (139aa)
PPOX class putative F420-dependent enzyme Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9U4_SPHTD
PPOX class putative F420-dependent enzyme
PPOX class putative F420-dependent enzyme {ECO:0000313|EMBL:ACZ40587.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_558_20
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(18230..18676)
DNA (447bp) protein (149aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003782977
hypothetical protein
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3_127_b2_sep16_scaffold_558_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(18695..19477)
DNA (783bp) protein (261aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos18H11 RepID=Q64D85_9ARCH
Crp/Fnr family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_558_22
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19681..20136)
DNA (456bp) protein (152aa)
Kelch repeat-containing protein bin=GWC2_Chloroflexi_73_18 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
kelch repeat-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_127_b2_sep16_scaffold_558_23
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(20133..21380)
DNA (1248bp) protein (416aa)
Kelch repeat-containing protein bin=GWC2_Chloroflexi_73_18 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
kelch repeat-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_127_b2_sep16_scaffold_558_24
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21751..22446)
DNA (696bp) protein (232aa)
Two-component system regulator Tax=Streptomyces sp. C RepID=D9W1Y7_9ACTO
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIF07569.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
two-component system regulator
PLM3_127_b2_sep16_scaffold_558_25
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22443..23585)
DNA (1143bp) protein (381aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00035D28AF
Histidine kinase {ECO:0000313|EMBL:KJY21393.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
two-component system sensor kinase
PLM3_127_b2_sep16_scaffold_558_26
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23815..24282)
DNA (468bp) protein (156aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003638BC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK33850.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
PLM3_127_b2_sep16_scaffold_558_27
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24625..25716
DNA (1092bp) protein (364aa)
2-nitropropane dioxygenase NPD Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P7V2_STRVO
2-nitropropane dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_127_b2_sep16_scaffold_558_28
unknown

Not on your lists

comp(25862..26254)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_558_29
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

Not on your lists

comp(26914..27399)
DNA (486bp) protein (162aa)
IS630 family transposase Tax=Rhodococcus opacus M213 RepID=K8XC07_RHOOP
Transposase ISLbp6 {ECO:0000313|EMBL:KJJ85336.1}; species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
IS630 family transposase
PLM3_127_b2_sep16_scaffold_558_30
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27590..28972)
DNA (1383bp) protein (461aa)
Amidase {ECO:0000313|EMBL:AEK44461.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AEK44461.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003634B47
amiE; amidase
Displaying items 1-30 of 32 in total

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