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PLM3_127_b2_sep16_scaffold_564

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_564_1
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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139..888
DNA (750bp) protein (250aa)
F420-dependent oxidoreductase family protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KUB5_9ACTO
F420-dependent oxidoreductase family protein {ECO:0000313|EMBL:EKX64386.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
luciferase family protein
PLM3_127_b2_sep16_scaffold_564_2
unknown

Not on your lists

1407..1616
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_564_3
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1881..2444
DNA (564bp) protein (188aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRU3_ACIC1
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK52153.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_127_b2_sep16_scaffold_564_4
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2441..3430
DNA (990bp) protein (330aa)
Uncharacterized protein Tax=Streptomyces viridochromogenes Tue57 RepID=L8PIS6_STRVR
Uncharacterized protein {ECO:0000313|EMBL:ELS55928.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
PLM3_127_b2_sep16_scaffold_564_5
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3609..3851
DNA (243bp) protein (81aa)
hypothetical protein Tax=Salinispora tropica RepID=UPI000304AC73
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP52697.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM3_127_b2_sep16_scaffold_564_6
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4454..6241)
DNA (1788bp) protein (596aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000370A08C
Uncharacterized protein {ECO:0000313|EMBL:EWT07486.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_564_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6706..7656)
DNA (951bp) protein (317aa)
Exopolyphosphatase-like protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W2J1_9ACTO
exopolyphosphatase-like protein
Exopolyphosphatase-like protein {ECO:0000313|EMBL:AGZ43349.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_127_b2_sep16_scaffold_564_8
unknown

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7857..8231
DNA (375bp) protein (125aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_564_9
unknown

Not on your lists

8477..8890
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_564_10
unknown

Not on your lists

8992..9357
DNA (366bp) protein (122aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_564_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9423..10898)
DNA (1476bp) protein (492aa)
malate dehydrogenase (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate decarboxylating) bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_564_12
unknown

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comp(10973..11068)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_564_13
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11095..11898
DNA (804bp) protein (268aa)
Transcriptional regulator for glyoxylate bypass Tax=Streptomyces RepID=Q9RKU6_STRCO
IclR family transcriptional regulator
Transcriptional regulator for glyoxylate bypass {ECO:0000313|EMBL:AIJ12398.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
PLM3_127_b2_sep16_scaffold_564_14
Eimeria brunetti, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(12084..13217)
DNA (1134bp) protein (378aa)
Uncharacterized protein Tax=Eimeria brunetti RepID=U6LD98_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ47213.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria brunetti.;"
Fe-S oxidoreductase
PLM3_127_b2_sep16_scaffold_564_15
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

13623..14249
DNA (627bp) protein (209aa)
Transcriptional regulator, MarR family Tax=Frankia sp. CN3 RepID=G6HPH1_9ACTO
MarR family transcriptional regulator
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_127_b2_sep16_scaffold_564_16
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14341..15219)
DNA (879bp) protein (293aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI000377418A
Putative ATPase chaperone CoxD {ECO:0000313|EMBL:KGA11165.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
coxD; carbon monoxide dehydrogenase, coxD ATPase accessory protein
PLM3_127_b2_sep16_scaffold_564_17
unknown

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comp(15221..15391)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_564_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15484..16545)
DNA (1062bp) protein (354aa)
Maleylacetate reductase Tax=Burkholderia multivorans CGD1 RepID=B9B687_9BURK
iron-containing alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_127_b2_sep16_scaffold_564_19
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16542..18020)
DNA (1479bp) protein (493aa)
Putative aldehyde dehydrogenase Tax=Burkholderia sp. SJ98 RepID=K8RGL8_9BURK
putative aldehyde dehydrogenase
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:EKS70308.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
PLM3_127_b2_sep16_scaffold_564_20
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(18186..19175)
DNA (990bp) protein (330aa)
hypothetical protein bin=bin7_NC10_sister species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_564_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19283..19780)
DNA (498bp) protein (166aa)
hypothetical protein bin=bin7_NC10_sister species=Sphingomonas sp. TTNP3 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hydroxyquinol 1,2-dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_564_22
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19911..20681
DNA (771bp) protein (257aa)
IclR family transcriptional regulator Tax=Amycolatopsis methanolica RepID=UPI000382A92C
pcaR; IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AIJ21468.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM3_127_b2_sep16_scaffold_564_23
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20920..23676
DNA (2757bp) protein (919aa)
Integral membrane sensor signal transduction histidine kinase Tax=Frankia sp. CN3 RepID=G6HDQ1_9ACTO
sensor with HAMP domain
Putative sensor with HAMP domain {ECO:0000313|EMBL:ADP82752.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_127_b2_sep16_scaffold_564_24
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23660..24082
DNA (423bp) protein (141aa)
Roadblock/LC7 family protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QFA9_CATAD
Roadblock/LC7 family protein
Roadblock/LC7 family protein {ECO:0000313|EMBL:ACU76686.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_127_b2_sep16_scaffold_564_25
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24101..24463
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6HDP9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIV91123.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
PLM3_127_b2_sep16_scaffold_564_26
unknown

Not on your lists

comp(24528..25499)
DNA (972bp) protein (324aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_564_27
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

25572..27017
DNA (1446bp) protein (482aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI00037ABE6F
hypothetical protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_127_b2_sep16_scaffold_564_28
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

27019..28014
DNA (996bp) protein (332aa)
TrkA-N domain protein Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8C9_THEID
TrkA-N domain-containing protein
TrkA-N domain protein {ECO:0000313|EMBL:AEH43933.1}; Flags: Precursor;; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
PLM3_127_b2_sep16_scaffold_564_29
unknown

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28528..28707
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_564_30

Not on your lists

28777..29385
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PQP2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH97247.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
deaminase-reductase domain-containing protein
Displaying items 1-30 of 32 in total

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