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PLM3_127_b2_sep16_scaffold_657

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_657_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..481
DNA (480bp) protein (160aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003688BD1
Uncharacterized protein {ECO:0000313|EMBL:EON22483.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_657_2
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(653..1153)
DNA (501bp) protein (167aa)
Integrase catalytic region Tax=Frankia sp. (strain EAN1pec) RepID=A8L925_FRASN
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ABW10848.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_127_b2_sep16_scaffold_657_3
unknown

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comp(1135..1386)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_657_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1383..2633)
DNA (1251bp) protein (417aa)
Transcriptional regulator, LuxR family Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9E5_GEOOG
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB75745.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_127_b2_sep16_scaffold_657_5
Toxoplasma gondii, Toxoplasma, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

2884..4356
DNA (1473bp) protein (491aa)
Chloride transporter, chloride channel (ClC) family protein Tax=Toxoplasma gondii GT1 RepID=S7UI33_TOXGO
Chloride channel protein {ECO:0000256|RuleBase:RU361221}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma.;" source="Toxoplasma gondii GAB2-2007-GAL-DOM2.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_657_6
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4464..5024
DNA (561bp) protein (187aa)
Putative acetyltransferase protein Tax=Frankia alni (strain ACN14a) RepID=Q0RFR1_FRAAA
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:KJE23812.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
acetyltransferase
PLM3_127_b2_sep16_scaffold_657_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5089..5820)
DNA (732bp) protein (244aa)
Methyltransferase domain protein bin=GWC2_Chloroflexi_73_18 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_657_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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6041..6643
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z012_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM64234.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
disulfide bond formation protein DsbB
PLM3_127_b2_sep16_scaffold_657_9
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6686..7390
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0N7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM64235.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_657_10
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

7542..8003
DNA (462bp) protein (154aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI00038165A7
Fur family ferric uptake regulator
Tax=RBG_16_Chloroflexi_50_11_curated
PLM3_127_b2_sep16_scaffold_657_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8117..8806
DNA (690bp) protein (230aa)
Cobalamin (Vitamin B12) biosynthesis CbiM protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC53_NAKMY
cobalamin (vitamin B12) biosynthesis protein CbiM
Cobalamin (Vitamin B12) biosynthesis CbiM protein {ECO:0000313|EMBL:ACV81447.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_127_b2_sep16_scaffold_657_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

8818..9162
DNA (345bp) protein (115aa)
Putative membrane protein Tax=Streptomyces viridochromogenes Tue57 RepID=L8PBT9_STRVR
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_657_13
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9166..9930
DNA (765bp) protein (255aa)
cobalt ABC transporter permease Tax=Streptomyces rapamycinicus RepID=UPI0003831523
Cobalt ABC transporter permease {ECO:0000313|EMBL:KDS86425.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
cobalt ABC transporter permease
PLM3_127_b2_sep16_scaffold_657_14
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9927..10721
DNA (795bp) protein (265aa)
Cobalt ABC transporter ATP-binding protein Tax=Streptomyces niveus NCIMB 11891 RepID=V6K6M5_STRNV
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EST24629.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
cobalt ABC transporter ATPase
PLM3_127_b2_sep16_scaffold_657_15
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10865..11317
DNA (453bp) protein (151aa)
Putative Fur family transcriptional regulator Tax=Ilumatobacter coccineus YM16-304 RepID=M5A169_9ACTN
putative Fur family transcriptional regulator
Putative Fur family transcriptional regulator {ECO:0000313|EMBL:BAN02497.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_127_b2_sep16_scaffold_657_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11424..12362
DNA (939bp) protein (313aa)
ABC-type metal ion transporter, periplasmic subunit Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AX21_FRADG
Manganese ABC transporter {ECO:0000313|EMBL:ETK34190.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
metal ion ABC transporter periplasmic protein
PLM3_127_b2_sep16_scaffold_657_17
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12352..13116
DNA (765bp) protein (255aa)
ABC transporter related protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y447_THEBD
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADG87101.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_127_b2_sep16_scaffold_657_18
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13113..13970
DNA (858bp) protein (286aa)
ABC-type transporter, integral membrane subunit Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AX20_FRADG
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEH11471.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_127_b2_sep16_scaffold_657_19
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14017..14895
DNA (879bp) protein (293aa)
ABC-type transporter, integral membrane subunit Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWB3_FRADG
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEH11470.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_127_b2_sep16_scaffold_657_20
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14937..16862)
DNA (1926bp) protein (642aa)
YibE/F family protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JYK7_SACES
YibE/F family protein
YibE/F family protein {ECO:0000313|EMBL:CCH29794.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_127_b2_sep16_scaffold_657_21

Not on your lists

17135..18103
DNA (969bp) protein (323aa)
putative metalloendopeptidase (EC:3.4.24.-)
Putative metalloendopeptidase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A538_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KKN31743.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_127_b2_sep16_scaffold_657_22
unknown

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18164..18769
DNA (606bp) protein (202aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_657_23
unknown

Not on your lists

18901..19644
DNA (744bp) protein (248aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_657_24
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19649..21628
DNA (1980bp) protein (660aa)
Copper resistance protein CopC Tax=Frankia sp. (strain CcI3) RepID=Q2J5C0_FRASC
copper resistance protein CopC
Copper resistance protein CopC {ECO:0000313|EMBL:ABD13522.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM3_127_b2_sep16_scaffold_657_25
unknown

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21640..22083
DNA (444bp) protein (148aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_657_26
unknown

Not on your lists

22314..22859
DNA (546bp) protein (182aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_657_27
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22856..24115
DNA (1260bp) protein (420aa)
Putative Leu/Ile/Val-binding protein homolog 8 Tax=Azospirillum brasilense Sp245 RepID=G8AP88_AZOBR
putative Leu/Ile/Val-binding protein homolog 8
Putative Leu/Ile/Val-binding protein homolog 8 {ECO:0000313|EMBL:CCD01061.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM3_127_b2_sep16_scaffold_657_28
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24112..25146
DNA (1035bp) protein (345aa)
Alpha-ketoglutarate decarboxylase {ECO:0000313|EMBL:EXU68087.1}; EC=4.1.1.71 {ECO:0000313|EMBL:EXU68087.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
PLM3_127_b2_sep16_scaffold_657_29
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25143..26234
DNA (1092bp) protein (364aa)
Putative uncharacterized protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TDB5_MICAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL44753.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM3_127_b2_sep16_scaffold_657_30
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26266..27930)
DNA (1665bp) protein (555aa)
Putative Monooxygenase Tax=Streptomyces viridochromogenes Tue57 RepID=L8PP82_STRVR
Putative Monooxygenase {ECO:0000313|EMBL:ELS57848.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
monooxygenase
Displaying items 1-30 of 31 in total

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