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PLM3_127_b2_sep16_scaffold_692

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_692_1
unknown

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2..766
DNA (765bp) protein (255aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_692_2
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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763..2808
DNA (2046bp) protein (682aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00036590DC
ATP-dependent DNA helicase
PLM3_127_b2_sep16_scaffold_692_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2878..3609)
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0RS44_FRAAA
Uncharacterized protein {ECO:0000313|EMBL:EXG79355.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_692_4
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3785..4450
DNA (666bp) protein (222aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACE8_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY99207.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_692_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5705..6988
DNA (1284bp) protein (428aa)
DhbC protein {ECO:0000313|EMBL:CAN95205.1}; EC=5.4.4.2 {ECO:0000313|EMBL:CAN95205.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00036F3DD0
dhbC; hypothetical protein
PLM3_127_b2_sep16_scaffold_692_6
unknown

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7014..7400
DNA (387bp) protein (129aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_692_7
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7452..9782
DNA (2331bp) protein (777aa)
preprotein translocase subunit SecD Tax=Streptomyces violaceoniger RepID=UPI0003C73FF8
Bifunctional preprotein translocase subunit SecD/SecF {ECO:0000313|EMBL:EGG47520.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
bifunctional preprotein translocase subunit SecD/SecF
PLM3_127_b2_sep16_scaffold_692_8
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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9996..10475
DNA (480bp) protein (160aa)
potassium transporter TrkA Tax=Actinomadura atramentaria RepID=UPI00036D46F9
Potassium transporter TrkA {ECO:0000313|EMBL:ETK34103.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
regulatory ligand-binding protein related to C-terminal domains of K+ channels-like protein
PLM3_127_b2_sep16_scaffold_692_9
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10481..11728
DNA (1248bp) protein (416aa)
Putative transmembrane transport protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R9L0_STRVP
putative transmembrane transport protein
Putative transmembrane transport protein {ECO:0000313|EMBL:CCA59053.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM3_127_b2_sep16_scaffold_692_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(11921..13849)
DNA (1929bp) protein (643aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0D3_CONWI
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase
PLM3_127_b2_sep16_scaffold_692_11
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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comp(14028..14459)
DNA (432bp) protein (144aa)
Cupin 2 conserved barrel domain protein Tax=Nitrolancetus hollandicus Lb RepID=I4EDS9_9CHLR
cupin
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
PLM3_127_b2_sep16_scaffold_692_12
unknown

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comp(14501..14686)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_692_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14986..15750
DNA (765bp) protein (255aa)
Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01660}; Short=SHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01660};; EC=4.2.99.20 {ECO:0000256|HAMAP-Rule:MF_01660};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
menH; putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC:4.2.99.20)
Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A1N5_9ACTN
PLM3_127_b2_sep16_scaffold_692_14
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

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comp(15759..16622)
DNA (864bp) protein (288aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
1,4-dihydroxy-2-naphthoateoctaprenyltransferase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SHG1_GEOOG
1,4-dihydroxy-2-naphthoateoctaprenyltransferase
PLM3_127_b2_sep16_scaffold_692_15
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(16628..17440)
DNA (813bp) protein (271aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
dihydroxynaphthoic acid synthetase Tax=Nocardiopsis chromatogenes RepID=UPI00034910ED
menB; naphthoate synthase
PLM3_127_b2_sep16_scaffold_692_16
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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17567..18811
DNA (1245bp) protein (415aa)
Ortho-succinylbenzoate-CoA synthetase Tax=Micromonospora sp. ATCC 39149 RepID=C4RCB4_9ACTO
Ortho-succinylbenzoate-CoA synthetase {ECO:0000313|EMBL:EEP73977.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
PLM3_127_b2_sep16_scaffold_692_17
unknown

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comp(18900..19100)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_692_18
unknown

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19548..19739
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_692_19
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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19742..22879
DNA (3138bp) protein (1046aa)
Transcriptional regulator, LuxR family bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
regulatory protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_127_b2_sep16_scaffold_692_20
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22948..24867)
DNA (1920bp) protein (640aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003634377
Uncharacterized protein {ECO:0000313|EMBL:ETK37030.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_692_21
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25342..26205
DNA (864bp) protein (288aa)
methyltransferase Tax=Amycolatopsis methanolica RepID=UPI0003785EFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ26560.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM3_127_b2_sep16_scaffold_692_22
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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26588..27166
DNA (579bp) protein (193aa)
amidohydrolase Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A1F9A
Amidohydrolase {ECO:0000313|EMBL:KIH99073.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
amidohydrolase 3
PLM3_127_b2_sep16_scaffold_692_23
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(27385..27498)
DNA (114bp) protein (38aa)
Transposase IS111A/IS1328/IS1533 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK47_PSEUX
Transposase IS1533 {ECO:0000313|EMBL:ETW24923.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
transposase
Displaying 23 items

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