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PLM3_127_b2_sep16_scaffold_816

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_816_1
unknown

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2..124
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_816_2
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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comp(736..1179)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RKD4_STRVP
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_816_3
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1344..2435)
DNA (1092bp) protein (364aa)
Fatty acid desaturase Tax=Streptomyces sviceus ATCC 29083 RepID=B5HW21_9ACTO
Fatty acid desaturase {ECO:0000313|EMBL:EDY57026.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
fatty acid desaturase
PLM3_127_b2_sep16_scaffold_816_4
unknown

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comp(2432..2710)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_816_5
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3032..4003)
DNA (972bp) protein (324aa)
Magnesium and cobalt transporter CorA Tax=Streptomyces sp. AA4 RepID=D9UZX7_9ACTO
Magnesium and cobalt transporter CorA {ECO:0000313|EMBL:EFL08902.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
corA; magnesium and cobalt transporter CorA
PLM3_127_b2_sep16_scaffold_816_6
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4372..5064
DNA (693bp) protein (231aa)
ABC transporter ATP-binding protein Tax=Aeromonas caviae RepID=UPI0002198983
ABC transporter {ECO:0000313|EMBL:KDV01763.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
ABC transporter
PLM3_127_b2_sep16_scaffold_816_7
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5067..5756
DNA (690bp) protein (230aa)
Probable ATP-binding ABC transporter protein Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ILB2_BORPD
ABC transporter ATP-binding protein
Probable ATP-binding ABC transporter protein {ECO:0000313|EMBL:CAP42563.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
PLM3_127_b2_sep16_scaffold_816_8
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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5746..8859
DNA (3114bp) protein (1038aa)
Putative uncharacterized protein Tax=Mycobacterium tusciae JS617 RepID=H1JYI0_9MYCO
hypothetical protein
Tax=BJP_08E140C01_Anaerolineales_40_8
PLM3_127_b2_sep16_scaffold_816_9
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9043..9993
DNA (951bp) protein (317aa)
Putative uncharacterized protein Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QL92_ARTGO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB13593.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_816_10
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10108..11430)
DNA (1323bp) protein (441aa)
Putative uncharacterized protein Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WIA8_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL25466.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
SCQ11.12c; hypothetical protein
PLM3_127_b2_sep16_scaffold_816_11
unknown

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11606..11767
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_816_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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12137..12394
DNA (258bp) protein (86aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
SpoVT/AbrB domain-containing protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_127_b2_sep16_scaffold_816_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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12385..12783
DNA (399bp) protein (133aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Ribonuclease VapC Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6D8_CONWI
PilT protein domain-containing protein
PLM3_127_b2_sep16_scaffold_816_14
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12872..13678)
DNA (807bp) protein (269aa)
Enoyl-CoA hydratase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4M8_MYXSD
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:KID31544.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
enoyl-CoA hydratase/isomerase
PLM3_127_b2_sep16_scaffold_816_15
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(13889..15949)
DNA (2061bp) protein (687aa)
Glycosyl transferase family 39 Tax=Frankia sp. (strain EAN1pec) RepID=A8LHL7_FRASN
glycosyl transferase family protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:ABW15836.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_127_b2_sep16_scaffold_816_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(16128..17843)
DNA (1716bp) protein (572aa)
Copper resistance protein CopC Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2P6_CONWI
copper resistance protein CopC
Copper resistance protein CopC {ECO:0000313|EMBL:ADB54177.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_127_b2_sep16_scaffold_816_17
unknown

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comp(17853..18275)
DNA (423bp) protein (141aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_816_18
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18423..19115
DNA (693bp) protein (231aa)
transcriptional regulator Tax=Fischerella muscicola RepID=UPI00031510B4
Response regulator mprA {ECO:0000313|EMBL:CCH77519.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
winged helix family transcriptional regulator
PLM3_127_b2_sep16_scaffold_816_19
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19076..20422)
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
histidine kinase Tax=Nocardiopsis alkaliphila RepID=UPI00034A6F8A
HAMP domain protein
PLM3_127_b2_sep16_scaffold_816_20
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20583..22391)
DNA (1809bp) protein (603aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003651F31
aprX; peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEV81404.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_127_b2_sep16_scaffold_816_21
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(22915..23565)
DNA (651bp) protein (217aa)
3''''-5'''' exonuclease Tax=Salinispora arenicola RepID=UPI00036201CA
DNA-directed DNA polymerase
DNA-directed DNA polymerase {ECO:0000313|EMBL:ABV99011.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM3_127_b2_sep16_scaffold_816_22
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24164..24490
DNA (327bp) protein (109aa)
UPI0003CFA7AB related cluster Tax=unknown RepID=UPI0003CFA7AB
Putative pyrophosphatase {ECO:0000313|EMBL:ETA01709.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
pyrophosphatase
PLM3_127_b2_sep16_scaffold_816_23
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(24540..25382)
DNA (843bp) protein (281aa)
Transposase, IS4 family Tax=Frankia sp. (strain CcI3) RepID=Q2JGA8_FRASC
transposase, IS4
Transposase, IS4 family {ECO:0000313|EMBL:ABD09684.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
Displaying 23 items

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