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PLM3_127_b2_sep16_scaffold_857

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_857_1
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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3..980
DNA (978bp) protein (326aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI0003807EE0
Transposase {ECO:0000313|EMBL:KJE19353.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
transposase IS66
PLM3_127_b2_sep16_scaffold_857_2
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1329..4229)
DNA (2901bp) protein (967aa)
Uncharacterized protein Tax=Clostridium thermocellum BC1 RepID=U4MP76_CLOTM
Helicase {ECO:0000313|EMBL:EWM19165.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
helicase domain-containing protein
PLM3_127_b2_sep16_scaffold_857_3
unknown

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4641..4874
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_857_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(4896..5786)
DNA (891bp) protein (297aa)
Integrase family protein Tax=Nitrolancetus hollandicus Lb RepID=I4EK45_9CHLR
Integrase family protein {ECO:0000313|EMBL:CCF85057.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
integrase family protein
PLM3_127_b2_sep16_scaffold_857_trna_4
unknown

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comp(5895..5966)
DNA (72bp)
transferRNA Val
PLM3_127_b2_sep16_scaffold_857_trna_3
unknown

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comp(6015..6091)
DNA (77bp)
transferRNA Cys
PLM3_127_b2_sep16_scaffold_857_trna_2
unknown

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comp(6151..6223)
DNA (73bp)
transferRNA Gly
PLM3_127_b2_sep16_scaffold_857_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6486..7088
DNA (603bp) protein (201aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY24_PSEUX
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA24265.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_127_b2_sep16_scaffold_857_6
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7073..7867
DNA (795bp) protein (265aa)
Anti-sigma-K factor RskA Tax=Streptomyces griseus XylebKG-1 RepID=G0Q7G9_STRGR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH95703.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3_127_b2_sep16_scaffold_857_7
unknown

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7906..7995
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_857_8
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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8033..8764
DNA (732bp) protein (244aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
Two-component sensor histidine kinase Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NDS1_GLOVI
two-component sensor histidine kinase
PLM3_127_b2_sep16_scaffold_857_9
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8761..9450
DNA (690bp) protein (230aa)
Response regulator receiver domain protein Tax=Streptomyces turgidiscabies Car8 RepID=L7FGL0_9ACTO
Response regulator receiver domain protein {ECO:0000313|EMBL:ELP70462.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
yxjL; transcriptional regulatory protein yxjL
PLM3_127_b2_sep16_scaffold_857_10
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9626..10855
DNA (1230bp) protein (410aa)
Metal dependent phophohydrolase Tax=Chloroflexus RepID=A9WBT8_CHLAA
response regulator receiver modulated metal dependent phosphohydrolase
Metal dependent phophohydrolase {ECO:0000313|EMBL:ABY34895.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
PLM3_127_b2_sep16_scaffold_857_11
unknown

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10931..11179
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_857_12
unknown

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11402..11623
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_857_13
unknown

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11779..11997
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_857_14

Not on your lists

12073..12522
DNA (450bp) protein (150aa)
TadE family protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RD43_AMMDK
Marine sediment metagenome DNA, contig: S06H3_S05585 {ECO:0000313|EMBL:GAI23670.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TadE family protein
PLM3_127_b2_sep16_scaffold_857_15
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12603..13331
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Arthrobacter sp. (strain FB24) RepID=A0JZ40_ARTS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK04310.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
PLM3_127_b2_sep16_scaffold_857_16
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13367..14569
DNA (1203bp) protein (401aa)
Cobyrinic acid a,c-diamide synthase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTI8_ACIC1
cobyrinic acid a,c-diamide synthase
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ABK52748.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_127_b2_sep16_scaffold_857_17
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14620..16023
DNA (1404bp) protein (468aa)
Type II secretion system protein E Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACT6_THECD
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ACY97425.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_857_18
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

16020..17969
DNA (1950bp) protein (650aa)
Type II secretion system protein Tax=Nocardioides sp. CF8 RepID=R7XVK4_9ACTO
type II secretion system F domain
Tax=GWC2_SYX_53_9_curated
PLM3_127_b2_sep16_scaffold_857_19
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17976..18911
DNA (936bp) protein (312aa)
Type II secretion system protein Tax=Nocardioides sp. CF8 RepID=R7XVI2_9ACTO
Type II secretion system protein {ECO:0000313|EMBL:EON23344.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_857_20
Sus scrofa, Sus, Mammalia, Chordata, Metazoa

Not on your lists

18921..21746
DNA (2826bp) protein (942aa)
Basic proline-rich protein Tax=Sus scrofa RepID=PRP_PIG
Basic proline-rich protein; Contains:; Proline-rich peptide SP-B-like; Short=PRP-SP-B-like;; Contains:; Proline-rich peptide SP-A; Short=PRP-SP-A;; Contains:; Proline-rich peptide SP-B; Short=PRP-SP-B;; Contains:; Parotid hormone; PH-Ab; Flags: Precursor;; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.;" source="Sus scrofa (Pig).;"
peptidase C14, caspase catalytic subunit p20
PLM3_127_b2_sep16_scaffold_857_21
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(21785..23362)
DNA (1578bp) protein (526aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZR0_ROSS1
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_127_b2_sep16_scaffold_857_trna_1
unknown

Not on your lists

23561..23632
DNA (72bp)
transferRNA Val
Displaying 25 items

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