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PLM3_127_b2_sep16_scaffold_408_22

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(28421..28780)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XUN3_PROPF similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 116.0
  • Bit_score: 161
  • Evalue 5.10e-37
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 116.0
  • Bit_score: 161
  • Evalue 1.40e-37
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 117.0
  • Bit_score: 161
  • Evalue 4.20e-37

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Taxonomy

Georgenia sp. SUBG003 → Georgenia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGGCAAGAGTCAAAAGGGCCGTCCACGGCGCCAAGGCGAAGCGGACGACCATGGAGCTGGCCAAGGGCTACCGGGCGAGCCGCGGGCATCACCTGCGGGCAGCGAACGAGCAGGTCAGGCACTCGCTGCGCTACGCCTACCGCGACCGGCGGGCGCGCAAGGGCGACTTCCGCGCCCTGTGGATCGCCCGGATCAACGCGGCGGCCCGAGCCGAGGGCCTCACCTACAACCGGTTCATCGCCGGTCTGCGGCACGCCGGGGTGGAGGTCGACCGCAAGGTCCTTGCCGACATCGCAGTCACCGACAAGGGCGCCTTCGCCGCCCTTGTCGCCACGGCCAGGGAAGGCCTCGCCAAGTAG
PROTEIN sequence
Length: 120
VARVKRAVHGAKAKRTTMELAKGYRASRGHHLRAANEQVRHSLRYAYRDRRARKGDFRALWIARINAAARAEGLTYNRFIAGLRHAGVEVDRKVLADIAVTDKGAFAALVATAREGLAK*