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PLM3_127_b2_sep16_scaffold_450_5

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 3610..4548

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y8L3_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 299.0
  • Bit_score: 293
  • Evalue 1.70e-76
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 299.0
  • Bit_score: 295
  • Evalue 6.40e-77
RpoD subfamily RNA polymerase sigma-70 similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 299.0
  • Bit_score: 293
  • Evalue 4.90e-77

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAAGGACCACGACCAGCTGCTCGATCTGCAGACGACGGATTCGTTCCGTCTGTACCTCGACGAGGTTGGCCGGCATCCCCTTCTGACCAAGGACGACGAGATCGAGCTGTCCCAGGCGTTCGAGGCTGGCCAGGCCGCCCAGGCCGCGCTGTGCGAGCTTCCCGCCGACGACCCGCACCGCCCGGGGCTGGAGGCCGAGGCGGAGCGGGGCGAGCGTGCACGGCGCAAGATGATCGAGTCGAATCTCCGGCTCGTGGTGTCGATCGCCCGGCGCTTCTCGGCAACGGGCCTGCCGCTCGGCGACCTCGTCCAGGAGGGGAACCTCGGCCTGCTCCGCGCTGTCGAGAAGTTCGACTGGCGCAAGGGCTTCAAGTTCTCGACCTACGCGACCTGGTGGATCCGTCAGGCGATCGCCCGGGGGGCGGCCGACCGGGGTGCGCGTGCCATCCGCCTGCCCGTGCATGTCGACGAGCAGGTCGGCCGGCTGCGCCGGACCCAGACCCGCCTGCACGAGACCCTCGGCCGCGAGCCCAGCGACGAGGAGCTCGCCGACGAGCTCGACATGCCGGTCGAGAAGGTCCACCGCCTCAAGGACACCGCCCAGACGATCACCTCGCTGGACACCCCGATCGGGGACGACGGCGCCGCCCTGCAGGACTTCCTGGAGGACGACTCCGCGGTCGGCCCCGACGAGCTGGCCGTCGAGGCGGTCGGCCGGGAGGCCCTCGAGCAGGTGCTCAGCGCCCTTCCCGAGCGCGAGCGGCAGGTGCTGATCCTCCGCTTCGGGCTCGACTCGGGCACCCCGCGCACCCTCGAGGAGGTCGGTGCGGTCATGGGCTTCAGCCGGGAGCGCGCCCGCCAGGTCGAGCGCGACGCCCTGGCCTGCCTGCGCAGTCCTGAGATCCGGGCCCGCCTCGAGGACCTGGTCGCCGCCTAG
PROTEIN sequence
Length: 313
MKDHDQLLDLQTTDSFRLYLDEVGRHPLLTKDDEIELSQAFEAGQAAQAALCELPADDPHRPGLEAEAERGERARRKMIESNLRLVVSIARRFSATGLPLGDLVQEGNLGLLRAVEKFDWRKGFKFSTYATWWIRQAIARGAADRGARAIRLPVHVDEQVGRLRRTQTRLHETLGREPSDEELADELDMPVEKVHRLKDTAQTITSLDTPIGDDGAALQDFLEDDSAVGPDELAVEAVGREALEQVLSALPERERQVLILRFGLDSGTPRTLEEVGAVMGFSRERARQVERDALACLRSPEIRARLEDLVAA*