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PLM3_127_b2_sep16_scaffold_450

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_450_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(136..1428)
DNA (1293bp) protein (431aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAV2_CONWI
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ADB51265.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_127_b2_sep16_scaffold_450_2
unknown

Not on your lists

1864..2046
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_450_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2154..2975
DNA (822bp) protein (274aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5M2_CONWI
enoyl-(acyl carrier protein) reductase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_450_4
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

2979..3308
DNA (330bp) protein (110aa)
Methylated-DNA/protein-cysteinemethyltransferase Tax=Clostridium sp. CAG:226 RepID=R5B399_9CLOT
methylated-DNA--protein-cysteine methyltransferase
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_127_b2_sep16_scaffold_450_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3610..4548
DNA (939bp) protein (313aa)
RNA polymerase sigma factor SigA Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y8L3_THEBD
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
RpoD subfamily RNA polymerase sigma-70
PLM3_127_b2_sep16_scaffold_450_6
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4633..5232
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0RNC5_FRAAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ60964.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_127_b2_sep16_scaffold_450_7
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

5298..6551
DNA (1254bp) protein (418aa)
23S rRNA methyltransferase/RumA Tax=Thermobifida fusca RepID=Q47NK9_THEFY
23S rRNA methyltransferase
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_450_8
unknown

Not on your lists

comp(6700..8064)
DNA (1365bp) protein (455aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_450_9
unknown

Not on your lists

comp(8076..8306)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_450_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8497..9339)
DNA (843bp) protein (281aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Methylenetetrahydrofolate reductase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ90_PSEUX
methylenetetrahydrofolate reductase
PLM3_127_b2_sep16_scaffold_450_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9417..10232)
DNA (816bp) protein (272aa)
Dolichyl-phosphate beta-D-mannosyltransferase Tax=Nocardioides sp. CF8 RepID=R7XRS7_9ACTO
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:EON22052.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
PAP2 superfamily protein
PLM3_127_b2_sep16_scaffold_450_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10232..11518)
DNA (1287bp) protein (429aa)
cardiolipin synthetase Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037BABC2
phospholipase D/transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:AAZ97004.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
PLM3_127_b2_sep16_scaffold_450_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11708..12505
DNA (798bp) protein (266aa)
phosphoesterase PA-phosphatase Tax=Frankia sp. Iso899 RepID=UPI0003B4C631
PA-phosphatase-like phosphoesterase
Phosphoesterase PA-phosphatase related {ECO:0000313|EMBL:ACV77030.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_127_b2_sep16_scaffold_450_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12688..13671
DNA (984bp) protein (328aa)
ribonuclease BN Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003808567
Ribonuclease BN {ECO:0000313|EMBL:ETK32724.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_450_15
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14033..15727
DNA (1695bp) protein (565aa)
trehalose synthase Tax=Patulibacter americanus RepID=UPI0003B74FB4
trehalose synthase
Trehalose synthase {ECO:0000313|EMBL:ABW10507.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_127_b2_sep16_scaffold_450_16
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

16576..17556
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZXS1_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_127_b2_sep16_scaffold_450_17
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17702..18064
DNA (363bp) protein (121aa)
Copper binding lipoprotein Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WUN8_9NOCA
Amicyanin
Copper binding lipoprotein {ECO:0000313|EMBL:EME15468.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
PLM3_127_b2_sep16_scaffold_450_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18127..18855
DNA (729bp) protein (243aa)
Iron dependent repressor Tax=Patulibacter medicamentivorans RepID=H0E7E2_9ACTN
Iron dependent repressor {ECO:0000313|EMBL:EHN10401.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
DtxR family iron (metal) dependent repressor
PLM3_127_b2_sep16_scaffold_450_trna_1
unknown

Not on your lists

18923..19007
DNA (85bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_450_19
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

19203..19466
DNA (264bp) protein (88aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5S9X0_9BACT
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_127_b2_sep16_scaffold_450_20
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19475..20893)
DNA (1419bp) protein (473aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI00036D170E
Regulatory protein {ECO:0000313|EMBL:EFE67129.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
regulator
PLM3_127_b2_sep16_scaffold_450_21
unknown

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21091..21243
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_450_22
unknown

Not on your lists

21237..21443
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_450_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21664..21951
DNA (288bp) protein (96aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003631F8B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26217.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_127_b2_sep16_scaffold_450_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22434..24326
DNA (1893bp) protein (631aa)
hypothetical protein Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00037804B1
Signaling protein ykoW
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_450_25
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

24484..25368
DNA (885bp) protein (295aa)
6-phosphogluconate dehydrogenase, NAD-binding protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYX9_RUBXD
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABG03399.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_127_b2_sep16_scaffold_450_26
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25640..27037
DNA (1398bp) protein (466aa)
Lysine 2,3-aminomutase Tax=Cystobacter fuscus DSM 2262 RepID=S9PN65_9DELT
Lysine 2,3-aminomutase {ECO:0000313|EMBL:KFA94660.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
kamA1; putative L-lysine 2,3-aminomutase
PLM3_127_b2_sep16_scaffold_450_27
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27178..28554)
DNA (1377bp) protein (459aa)
Putative 2-dehydro-3-deoxyheptonate aldolase Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9Z4X1_STRCO
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KIE50883.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
SCE8.03c; 2-dehydro-3-deoxyheptonate aldolase
PLM3_127_b2_sep16_scaffold_450_28
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28893..29729)
DNA (837bp) protein (279aa)
Uncharacterized protein Tax=Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) RepID=H2K6B5_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY85439.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM3_127_b2_sep16_scaffold_450_29
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29797..30564
DNA (768bp) protein (256aa)
Endonuclease IV (Apurinase) Tax=Mycobacterium sp. (strain JDM601) RepID=F5Z3F9_MYCSD
end; endonuclease IV (apurinase)
Endonuclease IV (Apurinase) {ECO:0000313|EMBL:AEF34685.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
Displaying items 1-30 of 36 in total

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