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PLM3_127_b2_sep16_scaffold_736_16

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 13557..14006

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 133.0
  • Bit_score: 125
  • Evalue 4.20e-26
Ribonuclease VapC Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDD2_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 133.0
  • Bit_score: 125
  • Evalue 3.00e-26
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 133.0
  • Bit_score: 125
  • Evalue 8.40e-27

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGATCCTCGCCGACACCTCGGCCTGGGTTGAGTACCTGCGAGCGACCGGGAGCCCGGTCCACCTGCGGATGCGGCACCTCGTGAGCGACGCGGCGGAGCTCGGTGTCACCGACGTGGTGGTCATGGCAGTGCTTGCGGGCGCCGGCAGCGACGACCGCGCGGTGCAGCTCCGCCGGCTGCTCAACCGCTTCGAGCTCGTCGCGGTGGAGGGTCCGGCCGACTTCGAGGCCGCCGCTGACCTCTACCGACGCTGCCGGCAGGGCGGCGAGACCGTGCGCAAGCTCACGGACTGCCTCATCGCCGCCGTCGCGCTGCGGGCTGATGCGGCGATCCTGCACCGGGATCGGGACTTCGACGTCATCGCCAGGCACGCGCCGCTGAAGCTCGCCACCTGGGCCGCTTCGTCGGCCCGGCCGACCGGAACGGTGACGGCGGCGTCCCCGTGGTAG
PROTEIN sequence
Length: 150
VILADTSAWVEYLRATGSPVHLRMRHLVSDAAELGVTDVVVMAVLAGAGSDDRAVQLRRLLNRFELVAVEGPADFEAAADLYRRCRQGGETVRKLTDCLIAAVALRADAAILHRDRDFDVIARHAPLKLATWAASSARPTGTVTAASPW*