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PLM3_127_b2_sep16_scaffold_736_22

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(19188..20432)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FDR8_VERMA similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 409.0
  • Bit_score: 543
  • Evalue 9.80e-152
putative ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 409.0
  • Bit_score: 543
  • Evalue 2.80e-152
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:AEB43599.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 409.0
  • Bit_score: 543
  • Evalue 1.40e-151

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Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
GTGACAGAGGTCCAGCAGGCGCTGGCCGAGGCGCACCGTCGCGAGTGGGCGTTCGTGCTCGCCGCGACGGTGCGCGTGGCCGGCGACCTCGACCTCGCCGAGGAGTGCGCCCAGGACGCCTTCGTCGCCGCGCTCGCGACCTGGGCCGAGCGCGGCGTCCCCAGGAACCCTGGCGCCTGGCTCACCACCGTCGCGCGGCACCGGGCCGTGGACGTGCTGCGCCGCGACCAGACGCTGCGCGGCAAGTTGCCGCTGCTCGTCGACGCGAACCCGTCGACGCCGGGCCCGGCGGAGCAGGAGGAGACGGGCGTGATCCCTGACGACCGGCTGCGGCTGGTGTTCACCTGCTGCCACCCGGCGCTGGCGCGCGAGGCCCAGGTCGCGCTGACGCTGCGCCTGGTGTGCGGGCTGACCACTGCCGAGATCGCGCGGGGGTTCCTGGTGAGCGAGCCGACCATGGCGGCCCGCATCACCCGGGCCAAGAAGAAGATCGCTACGGCCCGCATCCCCTACCGCGTCCCCCCGGCCCACGACCTGCCCGACCGGCTGGACGCGGTGCTCACCGTCGTCCACCTGCTCTACACGACCGGGCACACCGCTCCCCAGGGCGACACGCTGGTGCGGGCCGAGCTGGTCGAACGCGCCCTGGACCTGGCCCGGATGCTGCACGCCCTCATGCCCGACGACCGGGAGGTCCGCGGGCTGCTGGCGCTGCTGCTGCTCACCGACGCCCGCCGGGCGACGCGCACCACCGCCGACGGCCGGCTGCTCCTGCTCGAGGAGCAGGACCGCACCCAGTGGGACCAGCAGGCCATCACCGAGGGGCGCGAGCTGGTCCTGCACACGTTGCCCAGGGGCCGGCCGGGCCGGTTCACCCTGCAGGCGGCCATCGCCGCCGTGCACGCCGACGCGCCCACCTACGCCGACACCGACTGGCGTGAGGTGCTCAGCCTGTACGACATGCTGCTCGCGGTGTGGCCCTCCCCGGTGGTGGTGCTCAACCGCGCGGTCGCCGTCGCCATGGTCGACGGGCCAGCGGCTGGCCTGGCCGCCCTGGACGCTGTCGCCGACGACCCCCGCCTGGCCACGTATCCCTACCTGGCGGCCACCCGAGGCGACCTGCTCCGGCGACTCGGCCAGACCTGCGACGCCGCGCAGGCCTACCGGACCGCCCTCTCCCTGGCCACCAACACAGCCGAGCGGAACTTCCTCGCCCAGCGGCTCACCGAAGTCACTGACGCCTGA
PROTEIN sequence
Length: 415
VTEVQQALAEAHRREWAFVLAATVRVAGDLDLAEECAQDAFVAALATWAERGVPRNPGAWLTTVARHRAVDVLRRDQTLRGKLPLLVDANPSTPGPAEQEETGVIPDDRLRLVFTCCHPALAREAQVALTLRLVCGLTTAEIARGFLVSEPTMAARITRAKKKIATARIPYRVPPAHDLPDRLDAVLTVVHLLYTTGHTAPQGDTLVRAELVERALDLARMLHALMPDDREVRGLLALLLLTDARRATRTTADGRLLLLEEQDRTQWDQQAITEGRELVLHTLPRGRPGRFTLQAAIAAVHADAPTYADTDWREVLSLYDMLLAVWPSPVVVLNRAVAVAMVDGPAAGLAALDAVADDPRLATYPYLAATRGDLLRRLGQTCDAAQAYRTALSLATNTAERNFLAQRLTEVTDA*