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PLM3_127_b2_sep16_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 193 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_53_1
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2..505
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI000365F8E5
Endonuclease {ECO:0000313|EMBL:EST28840.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
endonuclease/exonuclease/phosphatase family protein
PLM3_127_b2_sep16_scaffold_53_2
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

754..1704
-----------------
DNA (951bp)
protein (317aa)
Uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J8A6_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL65405.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
PLM3_127_b2_sep16_scaffold_53_3
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1930..2118
-----------------
DNA (189bp)
protein (63aa)
Putative uncharacterized protein Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SDA5_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC31369.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
PLM3_127_b2_sep16_scaffold_53_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2217..2537
-----------------
DNA (321bp)
protein (107aa)
Putative uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJ28_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC81660.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM3_127_b2_sep16_scaffold_53_5
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2543..2941
-----------------
DNA (399bp)
protein (133aa)
Transcriptional regulator, XRE family Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJ29_ANADE
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABC81659.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM3_127_b2_sep16_scaffold_53_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3234..4046)
-----------------
DNA (813bp)
protein (271aa)
RNA polymerase sigma-E factor Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UJS4_MYXSD
RNA polymerase sigma-E factor
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_53_7
R_WOR_2_52_10, WOR-2, Bacteria

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comp(4052..4453)
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000380A8FB
polyketide cyclase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_52_10_curated
PLM3_127_b2_sep16_scaffold_53_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4646..4810)
-----------------
DNA (165bp)
protein (55aa)
Uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9F7_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL67345.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
PLM3_127_b2_sep16_scaffold_53_9
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4913..5113)
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9F6_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL67344.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
PLM3_127_b2_sep16_scaffold_53_10
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5348..6787)
-----------------
DNA (1440bp)
protein (480aa)
M20 (carboxypeptidase Ss1) subfamily protein (EC:3.4.-.-)
M20 (Carboxypeptidase Ss1) subfamily protein {ECO:0000313|EMBL:ABF92271.1}; EC=3.4.-.- {ECO:0000313|EMBL:ABF92271.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
M20 (Carboxypeptidase Ss1) subfamily protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D272_MYXXD
PLM3_127_b2_sep16_scaffold_53_11
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

7257..9539
-----------------
DNA (2283bp)
protein (761aa)
Radical SAM domain protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFR9_ANASK
radical SAM protein
Tax=RBG_13_Spirochaetes_68_11_curated
PLM3_127_b2_sep16_scaffold_53_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

10016..11707
-----------------
DNA (1692bp)
protein (564aa)
Regulator of chromosome condensation RCC1 bin=GWC2_Chloroflexi_73_18 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
regulator of chromosome condensation RCC1
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_127_b2_sep16_scaffold_53_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11725..15993)
-----------------
DNA (4269bp)
protein (1423aa)
Immunoglobulin I-set domain-containing protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUZ1_9BURK
Immunoglobulin I-set domain-containing protein {ECO:0000313|EMBL:EHR69768.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_53_14
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16099..19155)
-----------------
DNA (3057bp)
protein (1019aa)
Serine/threonine protein kinase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAK4_MYXSD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGC43464.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM3_127_b2_sep16_scaffold_53_15
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19152..20609)
-----------------
DNA (1458bp)
protein (486aa)
GntR family transcriptional regulator Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6L2_MYXSD
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AGC43465.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM3_127_b2_sep16_scaffold_53_16
unknown

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20961..21077
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_53_17
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21138..21644)
-----------------
DNA (507bp)
protein (169aa)
PKD domain-containing protein Tax=Alcanivorax pacificus W11-5 RepID=K2H270_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD49422.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
PLM3_127_b2_sep16_scaffold_53_18
unknown

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comp(21671..22156)
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_53_19
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22693..22932)
-----------------
DNA (240bp)
protein (80aa)
Helix-turn-helix domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H698_ANADF
helix-turn-helix domain-containing protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_53_20
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(23026..24324)
-----------------
DNA (1299bp)
protein (433aa)
Kelch repeat-containing protein Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAQ2_MEISD
Kelch repeat-containing protein
Kelch repeat-containing protein {ECO:0000313|EMBL:ADH62574.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
PLM3_127_b2_sep16_scaffold_53_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(25529..25894)
-----------------
DNA (366bp)
protein (122aa)
transposase bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transposase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_53_22
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26068..27546)
-----------------
DNA (1479bp)
protein (493aa)
Integrase, catalytic region Tax=Magnetococcus sp. (strain MC-1) RepID=A0LAQ5_MAGSM
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABK45048.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
PLM3_127_b2_sep16_scaffold_53_23
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27822..28271
-----------------
DNA (450bp)
protein (150aa)
hypothetical protein Tax=Sphingomonas echinoides RepID=UPI00026CC54D
Uncharacterized protein {ECO:0000313|EMBL:KHA63966.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_53_24
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

Not on your lists

comp(28268..29086)
-----------------
DNA (819bp)
protein (273aa)
Uncharacterized protein Tax=Bartonella schoenbuchensis m07a RepID=N6UGM9_9RHIZ
Tax=RBG_13_Spirochaetes_51_14_curated
PLM3_127_b2_sep16_scaffold_53_25
unknown

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29204..29554
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_53_26
unknown

Not on your lists

comp(30191..30982)
-----------------
DNA (792bp)
protein (264aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_53_27
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30995..31897)
-----------------
DNA (903bp)
protein (301aa)
hypothetical protein Tax=Cupriavidus sp. BIS7 RepID=UPI00035E8FFF
nucleotide-binding protein containing TIR -like protein domain-like protein
Tax=GWF1_Xanthomonadales_69_6_curated
PLM3_127_b2_sep16_scaffold_53_trna_5
unknown

Not on your lists

comp(32226..32299)
-----------------
DNA (74bp)
transferRNA Pro
PLM3_127_b2_sep16_scaffold_53_28
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32477..33232
-----------------
DNA (756bp)
protein (252aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H926_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS25222.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_53_29
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33213..33578)
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein Tax=Halococcus morrhuae DSM 1307 RepID=M0MHG8_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA45177.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
glutamate receptor
Displaying items 1-30 of 193 in total

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