ggKbase home page

PLM3_127_b2_sep16_scaffold_520_25

Organism: PLM3_127_b2_sep16_Deltaproteobacteria_Myxococcales_74_14

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(29192..30172)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 322.0
  • Bit_score: 522
  • Evalue 6.80e-146
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 322.0
  • Bit_score: 522
  • Evalue 3.40e-145
Pseudouridine synthase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IM03_ANADE similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 322.0
  • Bit_score: 522
  • Evalue 2.40e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaeromyxobacter dehalogenans → Anaeromyxobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
GTGATCACCTTCACCGTCTCCCCCGACGCCGCCGGCCAGCGGCTCGACAAGCTCGTGCGCAAGGCGCTGCGCGACGTGCCGCTCTCGCATGTCTACAAGATGTTCCGCACCCGGAAGATCCGGGTGAACGGCGCGCGCGGCCGGGCCGAGCAGGTGCTCGCCGAGGGCGACACGGTGGTCATTCGCGGGGACGAGGAGCGGCTCCTCGCCCGCCCCGAGACGGAGGGAGCCGCCGGGGGCGCCGCGCCGCGCGTCACCTTCAAGGTGCTGCACGAGGACGCCGACGTGCTCGTGGTGGACAAGCCGGCGGGCCTCGCCGCGCACCCCGGCACCGGCATCGAGGGGGCGACGCTCGTCGAGATGTCCCGCGGCTACCTGAAGGTCCCCGCCGACCTCCCGCCCACCGAGTTCAAGCCCTCGCCCGCCCACCGCCTCGACCGCGACACCTCCGGCGTCGTGATCGTCGCGAAGCACCGGAAGGCGATGGTGCGCCTCGGCGAGCTCTTCACGGAAGGTGACCAGGTCAAGAAGAGCTACCTCGCGCTCGCCAAGGGAAAGCTCTCGCGCGACCACGGCTTCATCGATCTGCCGCTCTCCGAGCACGAGCAGACCGGCCGCTCCAAGGAGCGGCGCGGCGTGAACATGCAGGAGGCGCTGACCCGCTGGAAGGTGCTCGGCGCGAACAAGGACGCCTCGCTCCTCGCGGTCGCCATCGAGACCGGGCGCACCCACCAGATCCGCCGCCACCTCGAGGCGATCGGCCACCCCGTCGCGGGGGACCGTCGCTACGGCGACTTCGCCTGGAACCGGGGGGCCCGCCAGCGCTGGGGCCTGCGCCGCATGTTCCTGCACGCGTGGAAGCTCGAGCTCCCGCACCCGGTCACCGGCGCGCCGCTCCGGCTCGAGGCGCCGCTCCCCGAGGAGCTCGAGGAGGTCCTGTCGCGGGCGAACCTGACGGCGCCGGCGCGCCGGCCCGCGTGA
PROTEIN sequence
Length: 327
VITFTVSPDAAGQRLDKLVRKALRDVPLSHVYKMFRTRKIRVNGARGRAEQVLAEGDTVVIRGDEERLLARPETEGAAGGAAPRVTFKVLHEDADVLVVDKPAGLAAHPGTGIEGATLVEMSRGYLKVPADLPPTEFKPSPAHRLDRDTSGVVIVAKHRKAMVRLGELFTEGDQVKKSYLALAKGKLSRDHGFIDLPLSEHEQTGRSKERRGVNMQEALTRWKVLGANKDASLLAVAIETGRTHQIRRHLEAIGHPVAGDRRYGDFAWNRGARQRWGLRRMFLHAWKLELPHPVTGAPLRLEAPLPEELEEVLSRANLTAPARRPA*