ggKbase home page

PLM3_127_b2_sep16_scaffold_520

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_520_1
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(237..3095)
DNA (2859bp) protein (953aa)
LigA Tax=Anaeromyxobacter sp. (strain K) RepID=B4UDB1_ANASK
LigA protein
LigA {ECO:0000313|EMBL:ACG74909.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM3_127_b2_sep16_scaffold_520_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3234..3965)
DNA (732bp) protein (244aa)
Rhomboid family protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6E0_ANADF
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ABS24286.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_520_3
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3971..4165)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=Anaeromyxobacter RepID=B4UKM1_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC79841.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM3_127_b2_sep16_scaffold_520_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4176..5372)
DNA (1197bp) protein (399aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ABC79840.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ABC79840.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Acetyl-CoA acetyltransferase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IM05_ANADE
PLM3_127_b2_sep16_scaffold_520_5
unknown

Not on your lists

comp(5384..5575)
DNA (192bp) protein (64aa)
hypothetical protein
PLM3_127_b2_sep16_scaffold_520_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5627..6418)
DNA (792bp) protein (264aa)
Sec-independent protein translocase protein TatC Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6D7_ANADF
Sec-independent protein translocase subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_520_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6415..6795)
DNA (381bp) protein (127aa)
Sec-independent translocation protein mttA/Hcf106 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6D6_ANADF
sec-independent translocation protein mttA/Hcf106
Sec-independent translocation protein mttA/Hcf106 {ECO:0000313|EMBL:ABS24282.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_520_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6894..7334
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J7U3_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL63435.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
PLM3_127_b2_sep16_scaffold_520_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7331..11020)
DNA (3690bp) protein (1230aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
1,4-alpha-glucan branching enzyme GlgB Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEX0_ANADF
1,4-alpha-glucan branching protein
PLM3_127_b2_sep16_scaffold_520_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11041..13068)
DNA (2028bp) protein (676aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEX1_ANADF
alpha amylase
PLM3_127_b2_sep16_scaffold_520_11
unknown

Not on your lists

comp(13198..13593)
DNA (396bp) protein (132aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_520_12
unknown

Not on your lists

14625..14837
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_520_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15127..15909
DNA (783bp) protein (261aa)
Transposase mutator type Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H988_ANADF
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:ABS25284.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_520_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16015..16200)
DNA (186bp) protein (62aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFJ2_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27488.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_520_15
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16216..16668)
DNA (453bp) protein (151aa)
hypothetical protein Tax=Curvibacter lanceolatus RepID=UPI00036A480F
PilT protein domain-containing protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_520_16
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16665..16919)
DNA (255bp) protein (85aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_520_17
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17035..17892)
DNA (858bp) protein (286aa)
hypothetical protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00036EA46D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ70930.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
PLM3_127_b2_sep16_scaffold_520_18
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

18179..19330
DNA (1152bp) protein (384aa)
Putative transposase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNN4_9BURK
putative transposase
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
PLM3_127_b2_sep16_scaffold_520_19
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19535..19966)
DNA (432bp) protein (144aa)
Putative nucleic acid-binding protein, contains PIN domain bin=GWC2_Chloroflexi_73_18 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative nucleic acid-binding protein, contains PIN domain
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_520_20
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19963..20211)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PGZ6_9ZZZZ
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_520_21
unknown

Not on your lists

comp(20706..21740)
DNA (1035bp) protein (345aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_520_22
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21968..23857)
DNA (1890bp) protein (630aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEX2_ANADF
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_127_b2_sep16_scaffold_520_23
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24333..26426)
DNA (2094bp) protein (698aa)
Methyl-accepting chemotaxis sensory transducer Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IM01_ANADE
Protein PilJ {ECO:0000313|EMBL:GAO01586.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
methyl-accepting chemotaxis sensory transducer
PLM3_127_b2_sep16_scaffold_520_24
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26468..29044)
DNA (2577bp) protein (859aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ABS24280.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABS24280.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Penicillin-binding protein, 1A family Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6D4_ANADF
1A family penicillin-binding protein
PLM3_127_b2_sep16_scaffold_520_25
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29192..30172)
DNA (981bp) protein (327aa)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Pseudouridine synthase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IM03_ANADE
PLM3_127_b2_sep16_scaffold_520_26
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30277..30954
DNA (678bp) protein (226aa)
O-methyltransferase family 3 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6D2_ANADF
O-methyltransferase family protein
O-methyltransferase family 3 {ECO:0000313|EMBL:ABS24278.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_520_27
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30997..31989)
DNA (993bp) protein (331aa)
Putative mRNA 3'-end processing factor Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6D1_ANADF
putative mRNA 3'-end processing factor
Putative mRNA 3'-end processing factor {ECO:0000313|EMBL:ABS24277.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_520_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32163..33473
DNA (1311bp) protein (437aa)
Secretion protein HlyD Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IDT3_ANADE
Macrolide-specific efflux protein MacA {ECO:0000313|EMBL:EYF04721.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
secretion protein HlyD
PLM3_127_b2_sep16_scaffold_520_29
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33484..34215
DNA (732bp) protein (244aa)
ABC transporter-related protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKE3_ANASK
ABC transporter
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_520_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34212..35438
DNA (1227bp) protein (409aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUU2_CORCM
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:EYF04722.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying items 1-30 of 59 in total

View Taxonomy