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PLM3_127_b2_sep16_scaffold_4447

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4447_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..260)
DNA (258bp) protein (86aa)
FAD/FMN-containing dehydrogenase Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWW5_TISMK
FAD/FMN-containing dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_4447_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

584..1123
DNA (540bp) protein (180aa)
Small permease component of tripartite tricarboxylate transporter Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXI5_JANMA
tctB6; small permease of tripartite tricarboxylate transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1154..2608
DNA (1455bp) protein (485aa)
Tricarboxylate transport protein TctA Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXI6_JANMA
tctA6; tricarboxylate transport protein TctA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2738..3790
DNA (1053bp) protein (351aa)
2-dehydropantoate 2-reductase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQ09_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_5
unknown

Not on your lists

comp(4004..4576)
DNA (573bp) protein (191aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4447_6
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4684..5394)
DNA (711bp) protein (237aa)
Putative uncharacterized protein Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BGT2_CHLPD
Uncharacterized protein {ECO:0000313|EMBL:AKH19079.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_4447_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5697..6443
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J6LL05_9RHOB
polysaccharide deacetylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_8
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

6647..7516
DNA (870bp) protein (290aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate delta-isomerase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATI0_RUBXD
Tax=RBG_16_Aminicenantes_63_16_curated
PLM3_127_b2_sep16_scaffold_4447_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7796..9031
DNA (1236bp) protein (412aa)
2-isopropylmalate synthase Tax=Rhodovulum sp. PH10 RepID=J5PCK3_9RHOB
pyruvate carboxyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9439..10542)
DNA (1104bp) protein (368aa)
branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.168)
Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase Tax=Thauera RepID=C4ZNV8_THASP
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10663..11643)
DNA (981bp) protein (327aa)
2-oxoisovalerate dehydrogenase subunit beta Tax=Azoarcus toluclasticus RepID=UPI0003662223
pdhB; pyruvate dehydrogenase E1 component (beta subunit) oxidoreductase protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11831..12910)
DNA (1080bp) protein (360aa)
pyruvate dehydrogenase E1 component (alpha subunit) oxidoreductase protein (EC:1.2.4.1)
Putative pyruvate dehydrogenase E1 component (Alpha subunit) oxidoreductase protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5S9_AROAE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13497..15314)
DNA (1818bp) protein (606aa)
ABC transporter, ATP-binding protein Tax=Sutterella parvirubra YIT 11816 RepID=H3KHH3_9BURK
ABC transporter, ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_4447_14
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15804..16295)
DNA (492bp) protein (164aa)
ABC-type molybdate transport system, periplasmic component Tax=Polaromonas sp. CF318 RepID=J2U1D2_9BURK
ABC-type molybdate transport system, periplasmic component {ECO:0000313|EMBL:EJL84932.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_4447_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16518..17516)
DNA (999bp) protein (333aa)
Tricarboxylate binding receptor Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXI4_JANMA
tctC6; tricarboxylate binding receptor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_4447_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17646..18716
DNA (1071bp) protein (357aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_4447_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18730..19011
DNA (282bp) protein (94aa)
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_4447_18
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19033..19257
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_4447_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19408..20373
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QQZ5_RALPI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_4447_20
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20465..20836
DNA (372bp) protein (124aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00037C3280
RNA-binding S4 domain-containing protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_4447_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21247..21585
DNA (339bp) protein (113aa)
Cupin region Tax=Variovorax paradoxus (strain S110) RepID=C5CTH6_VARPS
cupin region
Cupin region {ECO:0000313|EMBL:ACS20164.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
PLM3_127_b2_sep16_scaffold_4447_22
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21696..22469
DNA (774bp) protein (258aa)
Molybdate ABC transporter periplasmic molybdate-binding protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IC50_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_127_b2_sep16_scaffold_4447_23
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22729..23007
DNA (279bp) protein (93aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00037FEADB
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EIG58395.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
PLM3_127_b2_sep16_scaffold_4447_24
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

23114..23851
DNA (738bp) protein (246aa)
pseudouridine synthase, rsuA family (EC:5.4.99.-)
Pseudouridine synthase bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
PLM3_127_b2_sep16_scaffold_4447_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23888..24613
DNA (726bp) protein (242aa)
glutathione S-transferase P subunit (EC:2.5.1.18)
Putative glutathione S-transferase P subunit Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P641_AROAE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_4447_26
unknown

Not on your lists

24798..26597
DNA (1800bp) protein (600aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4447_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26871..27521)
DNA (651bp) protein (217aa)
Uncharacterized protein Tax=Mycobacterium smegmatis JS623 RepID=L0IUF2_MYCSM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_4447_28
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27640..28011)
DNA (372bp) protein (124aa)
Prevent-host-death family protein Tax=Mycobacterium smegmatis JS623 RepID=L0IRX2_MYCSM
prevent-host-death family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_29
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28218..28463
DNA (246bp) protein (82aa)
Putative uncharacterized protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DMY9_9GAMM
CopG family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_4447_30
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28441..28956
DNA (516bp) protein (172aa)
PilT domain-containing protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQR5_THISH
PilT domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying items 1-30 of 32 in total

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