ggKbase home page

PLM3_127_b2_sep16_scaffold_17188

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_17188_1
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..407
DNA (405bp) protein (135aa)
metC; cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase, PLP-dependent (Beta-cystathionase) Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHJ5_HYPSM
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
PLM3_127_b2_sep16_scaffold_17188_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(502..747)
DNA (246bp) protein (82aa)
hypothetical protein Tax=Janthinobacterium sp. CG3 RepID=UPI00034CCDD9
bacterial Ig-like domain family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_17188_3
unknown

Not on your lists

1224..1646
DNA (423bp) protein (141aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_17188_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1609..2208)
DNA (600bp) protein (200aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI000376707F
Ig domain protein, group 1 domain protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_17188_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2557..3594)
DNA (1038bp) protein (346aa)
Methionine synthase II (Cobalamin-independent) Tax=Rhizobium sp. CF080 RepID=J2JWC2_9RHIZ
Putative 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (Cobalamin-independent methionine synthase)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_17188_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3591..4808)
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI0003653C5F
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_17188_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4892..5206
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_17188_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5244..5525
DNA (282bp) protein (94aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003822C0D
D-galactarate dehydratase/altronate hydrolase, N-terminal
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_17188_9
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5530..5796
DNA (267bp) protein (89aa)
D-galactarate dehydratase/Altronate hydrolase, C-terminal (EC:4.2.1.7)
Altronate dehydratase Tax=Herminiimonas arsenicoxydans RepID=A4GAA4_HERAR
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_127_b2_sep16_scaffold_17188_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5835..6755
DNA (921bp) protein (307aa)
altronate dehydratase (EC:4.2.1.7)
Altronate dehydratase Tax=mine drainage metagenome RepID=E6PVD0_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_17188_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6829..7398
DNA (570bp) protein (190aa)
Putative lipoprotein transmembrane Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUT9_ACCPU
putative lipoprotein transmembrane
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_17188_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7415..7873)
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4YFB4_SORCE
hypothetical protein
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying 12 items

View Taxonomy