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PLM3_127_b2_sep16_scaffold_2460

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2460_1
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..163)
DNA (162bp) protein (54aa)
UPI0003A55A76 related cluster Tax=unknown RepID=UPI0003A55A76
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EXI88753.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
AbrB family DNA-binding protein
PLM3_127_b2_sep16_scaffold_2460_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264..512
DNA (249bp) protein (83aa)
Post-segregation antitoxin (Ccd killing mechanism protein) encoded by the F plasmid Tax=Pseudomonas sp. (strain M1) RepID=L1HQB5_PSEUO
CcdB antidote CcdA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2460_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

512..829
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6ACF9_PSERE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2460_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(896..1240)
DNA (345bp) protein (115aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLU9_ROSCS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2460_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1227..1865)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AJV5_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_2460_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1973..2626
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZWT1_9BACT
3'-5' exonuclease
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_2460_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2695..2982
DNA (288bp) protein (96aa)
hypothetical protein Tax=Verminephrobacter aporrectodeae RepID=UPI0002377ECF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_2460_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3093..3371
DNA (279bp) protein (93aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_2460_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3467..3685
DNA (219bp) protein (73aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_2460_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3827..4078)
DNA (252bp) protein (84aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2460_11
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4281..4595
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6ABL2_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PLM3_127_b2_sep16_scaffold_2460_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4851..5696)
DNA (846bp) protein (282aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=Polaromonas sp. CF318 RepID=J2TI72_9BURK
response regulator receiver domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_2460_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5723..6097)
DNA (375bp) protein (125aa)
hypothetical protein
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Halothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_2460_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6094..6321)
DNA (228bp) protein (76aa)
Putative uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3D5M6_9ACTO bin=RBG2 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_2460_15
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6440..6793)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DFF3_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_2460_16
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7033..7287)
DNA (255bp) protein (85aa)
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3_127_b2_sep16_scaffold_2460_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7317..8093)
DNA (777bp) protein (259aa)
Uncharacterized protein Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YRR0_9CHLB
restriction endonuclease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_2460_18
unknown

Not on your lists

comp(8246..8365)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2460_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8519..9862)
DNA (1344bp) protein (448aa)
ATP-dependent RNA helicase RhlE Tax=Burkholderia sp. RPE64 RepID=R4WW93_9BURK
DEAD/DEAH box helicase domain protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_2460_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10542..11039
DNA (498bp) protein (166aa)
Transcriptional regulator, XRE family Tax=Variovorax paradoxus (strain S110) RepID=C5D091_VARPS
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_2460_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11021..11662
DNA (642bp) protein (214aa)
Putative uncharacterized protein Tax=Variovorax paradoxus RepID=C5D090_VARPS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_2460_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11731..12090)
DNA (360bp) protein (120aa)
Putative uncharacterized protein Tax=gamma proteobacterium HTCC5015 RepID=B5JUE2_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_2460_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12123..12473)
DNA (351bp) protein (117aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_2460_24
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12720..13334
DNA (615bp) protein (205aa)
UPF0301 protein Cwoe_0090 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F443_CONWI
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_2460_25
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13481..14350)
DNA (870bp) protein (290aa)
Protein bugT Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDT9_9BURK
Protein bugT {ECO:0000313|EMBL:CBA31502.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2460_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14499..15596)
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00037860EB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_2460_27
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15733..16470)
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Paenibacillus barengoltzii G22 RepID=R9LJY6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EOS56067.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
aldo/keto reductase
Displaying 27 items

View Taxonomy