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PLM3_127_b2_sep16_scaffold_1275

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1275_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..425
DNA (423bp) protein (141aa)
GlcG protein Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SW64_JANMA
glcG1; GlcG protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_1275_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(335..694)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMZ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58794.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_127_b2_sep16_scaffold_1275_3
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(732..1340)
DNA (609bp) protein (203aa)
Acetyltransferase (GNAT) domain Tax=uncultured organism RepID=T1W5C2_9ZZZZ
GCN5-related N-acetyltransferase
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3_127_b2_sep16_scaffold_1275_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1443..1841)
DNA (399bp) protein (133aa)
aldehyde-activating protein Tax=Acidovorax radicis RepID=UPI00023777E9
Uncharacterized protein {ECO:0000313|EMBL:CCV03329.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Gfa-like protein
PLM3_127_b2_sep16_scaffold_1275_5
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1916..2329)
DNA (414bp) protein (138aa)
Phosphinothricin n-acetyltransferase, putative Tax=Hydrocarboniphaga effusa AP103 RepID=I8TC11_9GAMM
Phosphinothricin n-acetyltransferase, putative {ECO:0000313|EMBL:EIT71163.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
N-acetyltransferase GCN5
PLM3_127_b2_sep16_scaffold_1275_6
unknown

Not on your lists

2686..2859
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1275_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2887..3246)
DNA (360bp) protein (120aa)
protocatechuate 4,5-dioxygenase (EC:1.13.11.8)
protocatechuate 4,5-dioxygenase subunit alpha Tax=Curvibacter lanceolatus RepID=UPI0003774EC4
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_1275_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3243..4175)
DNA (933bp) protein (311aa)
Protocatechuate 4,5-dioxygenase subunit beta Tax=Pandoraea sp. SD6-2 RepID=R7X359_9BURK
protocatechuate 3,4-dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_1275_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4189..5079)
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12H31_POLSJ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1275_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5076..5699)
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Achromobacter piechaudii HLE RepID=J4P9U9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGY24598.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1275_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5706..7229)
DNA (1524bp) protein (508aa)
Class I fumarate hydratase Tax=Burkholderia multivorans RepID=A9AG41_BURM1
tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1275_12
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7240..7773)
DNA (534bp) protein (178aa)
UPF0114 protein Msip34_0999 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XCH1_METSD
hypothetical protein
UPF0114 protein Msip34_0999 {ECO:0000256|HAMAP-Rule:MF_00143}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
PLM3_127_b2_sep16_scaffold_1275_13
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7851..8570)
DNA (720bp) protein (240aa)
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JFI4_BURP8
uroporphyrin-III C/tetrapyrrole methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
PLM3_127_b2_sep16_scaffold_1275_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8560..9135)
DNA (576bp) protein (192aa)
Maf-like protein CAP2UW1_1532 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTM1_ACCPU
maf protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1275_15
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9152..9595)
DNA (444bp) protein (148aa)
Putative uncharacterized protein Tax=Pseudomonas fulva (strain 12-X) RepID=F6A9M4_PSEF1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_1275_16
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9680..10105
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Azoarcus sp. (strain BH72) RepID=A1K5Y2_AZOSB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1275_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10124..10303
DNA (180bp) protein (60aa)
50S ribosomal protein L32 Tax=Azoarcus sp. KH32C RepID=H0PU37_9RHOO
rpmF; 50S ribosomal protein L32
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1275_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10390..11412
DNA (1023bp) protein (341aa)
Phosphate acyltransferase Tax=Nitrosospira sp. APG3 RepID=M5DIQ2_9PROT
plsX; fatty acid/phospholipid synthesis protein plsx
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1275_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11409..12368
DNA (960bp) protein (320aa)
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH2_AZOSU
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1275_20
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12386..13309
DNA (924bp) protein (308aa)
malonyl CoA-ACP transacylase Tax=Herbaspirillum sp. JC206 RepID=UPI00037E7DC5
fabD; [acyl-carrier-protein] S-malonyltransferase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1275_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13306..14052
DNA (747bp) protein (249aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH4_AZOSU
3-oxoacyl-(acyl-carrier-protein) reductase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1275_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14138..14380
DNA (243bp) protein (81aa)
Acyl carrier protein Tax=Azoarcus sp. (strain BH72) RepID=ACP_AZOSB
acpP; acyl carrier protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1275_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14398..15642
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Nitrosospira sp. APG3 RepID=M5DIQ6_9PROT
fabF; 3-oxoacyl-[acyl carrier protein] synthase I
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1275_24
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15706..16170
DNA (465bp) protein (155aa)
hypothetical protein bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1275_25
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16319..16918
DNA (600bp) protein (200aa)
RNA polymerase sigma factor Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH9_AZOSU
RNA polymerase sigma factor RpoE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1275_26
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16923..17465
DNA (543bp) protein (181aa)
Sigma factor RpoE negative regulatory protein RseA Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FE82_9GAMM
anti sigma-E protein RseA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1275_27
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17462..18448
DNA (987bp) protein (329aa)
Sigma factor regulatory protein Tax=Azoarcus sp. KH32C RepID=H0PU26_9RHOO
rseB; sigma factor regulatory protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1275_28
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18530..18877
DNA (348bp) protein (116aa)
peptidase Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035DFEEC
peptidase S1C, Do
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Displaying 28 items

View Taxonomy