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PLM3_127_b2_sep16_scaffold_1406

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1406_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1052
DNA (1050bp) protein (350aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036EC567
hypothetical protein
Tax=CG_Rhodocyc_01
PLM3_127_b2_sep16_scaffold_1406_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1058..1813
DNA (756bp) protein (252aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YWE1_9BACT
phosphatidylinositol 4-phosphate 5-kinase
Tax=CG_Rhodocyc_01
PLM3_127_b2_sep16_scaffold_1406_3
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1912..2259
DNA (348bp) protein (116aa)
VanZ family protein Tax=Sulfuricella denitrificans skB26 RepID=S6A9C6_9PROT
VanZ family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_1406_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2637..4388)
DNA (1752bp) protein (584aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I SpoT/RelA Tax=Sulfuricella denitrificans skB26 RepID=S6AIK6_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1406_5
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4435..4743
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KFB70671.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
PLM3_127_b2_sep16_scaffold_1406_6
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4891..5100)
DNA (210bp) protein (70aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega Tax=Methyloversatilis sp. NVD RepID=UPI0003682A3D
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_1406_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(5143..5757)
DNA (615bp) protein (205aa)
kguA; KguA (EC:2.7.4.8)
Guanylate kinase Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z8F5_9RHOO
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_127_b2_sep16_scaffold_1406_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5947..6807)
DNA (861bp) protein (287aa)
Protein YicC Tax=Nitrosospira sp. APG3 RepID=M5DFA6_9PROT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1406_9
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6887..7279
DNA (393bp) protein (131aa)
Serine/threonine protein kinase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFA0_AZOSU
serine/threonine protein kinase
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
PLM3_127_b2_sep16_scaffold_1406_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7219..7794
DNA (576bp) protein (192aa)
Putative serine/threonine protein kinase Tax=Azoarcus sp. KH32C RepID=H0Q0C6_9RHOO
putative serine/threonine protein kinase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1406_11
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7791..8693
DNA (903bp) protein (301aa)
Serine/threonine protein phosphatase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QF99_AZOSU
serine/threonine protein phosphatase
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
PLM3_127_b2_sep16_scaffold_1406_12
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8731..9489
DNA (759bp) protein (253aa)
Ribonuclease PH Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DL86_9BURK
ribonuclease PH
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
PLM3_127_b2_sep16_scaffold_1406_13
unknown

Not on your lists

9486..9824
DNA (339bp) protein (113aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1406_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9657..10019)
DNA (363bp) protein (121aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_1406_15
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10160..10783
DNA (624bp) protein (208aa)
Non-canonical purine NTP pyrophosphatase Tax=Burkholderiaceae RepID=Q0KD28_CUPNH
h16_A0948; deoxyribonucleotide triphosphate pyrophosphatase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_1406_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10780..11961
DNA (1182bp) protein (394aa)
coproporphyrinogen III oxidase-like protein, oxygen-independent (EC:1.3.99.22)
Coproporphyrinogen III oxidase-like protein, oxygen-independent Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGP3_COLFT
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1406_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12089..12319
DNA (231bp) protein (77aa)
hypothetical protein Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI0003723321
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1406_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12294..13010)
DNA (717bp) protein (239aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=TRMB_NITMU
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1406_19
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13165..14019)
DNA (855bp) protein (285aa)
Thiazole synthase Tax=Sulfuricella denitrificans skB26 RepID=S6AIM5_9PROT
thiazole synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1406_20
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14024..14227)
DNA (204bp) protein (68aa)
Thiamine biosynthesis protein ThiS Tax=Azoarcus sp. (strain BH72) RepID=A1KCN0_AZOSB
thiS; thiamine biosynthesis protein ThiS
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_1406_21
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

14697..15152
DNA (456bp) protein (152aa)
id=2484536 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM3_127_b2_sep16_scaffold_1406_trna_1
unknown

Not on your lists

15202..15272
DNA (71bp)
transferRNA Gly
PLM3_127_b2_sep16_scaffold_1406_22
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15303..16208
DNA (906bp) protein (302aa)
5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXE4_NITHN
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_1406_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16219..18003
DNA (1785bp) protein (595aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI000382E778
putative AsmA family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1406_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18000..19040
DNA (1041bp) protein (347aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
A/G-specific adenine glycosylase (EC:3.2.2.-)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1406_25
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19037..19621)
DNA (585bp) protein (195aa)
Peptidase S16, lon domain protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJH4_AZOSU
peptidase S16, lon domain-containing protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_1406_26
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19643..20251)
DNA (609bp) protein (203aa)
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX Tax=Nitrosospira sp. APG3 RepID=M5DFA8_9PROT
aromatic acid decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_1406_27
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20248..21093)
DNA (846bp) protein (282aa)
UPF0042 nucleotide-binding protein SCD_n00553 Tax=Sulfuricella denitrificans skB26 RepID=S6A9N1_9PROT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1406_28
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21244..22167)
DNA (924bp) protein (308aa)
HPr kinase/phosphorylase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH18_AZOSU
serine kinase of the HPr protein, regulates carbohydrate metabolism
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1406_29
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22136..22621)
DNA (486bp) protein (162aa)
ptsN; phosphotransferase system mannitol/fructose-specific IIA domain-containing protein (EC:2.7.1.69)
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P3S3_AROAE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Displaying items 1-30 of 43 in total

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