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PLM3_127_b2_sep16_scaffold_1512

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1512_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6..1298)
DNA (1293bp) protein (431aa)
adenylosuccinate synthetase Tax=Leeia oryzae RepID=UPI00035CA416
adenylosuccinate synthetase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1512_2
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1309..2457)
DNA (1149bp) protein (383aa)
ATP phosphoribosyltransferase regulatory subunit Tax=Ralstonia solanacearum RepID=D8NK87_RALSL
ATP phosphoribosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_1512_3
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2466..2651)
DNA (186bp) protein (62aa)
Putative inner membrane protein YjeT (Clustered with HflC) Tax=Nitrosospira sp. APG3 RepID=M5DF43_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1512_4
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2652..3530)
DNA (879bp) protein (293aa)
Protein HflC Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI63_AZOSU
membrane protease subunit, stomatin/prohibitin
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
PLM3_127_b2_sep16_scaffold_1512_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3527..4711)
DNA (1185bp) protein (395aa)
HflK protein Tax=Nitrosospira sp. APG3 RepID=M5DGM1_9PROT
HflK protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1512_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4720..5877)
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Massilia niastensis RepID=UPI000378EFD8
GTP-binding proten HflX
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1512_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5909..6151)
DNA (243bp) protein (81aa)
RNA-binding protein Hfq Tax=Cupriavidus sp. HMR-1 RepID=L2ELU2_9BURK
hfq; RNA chaperone Hfq protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1512_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6262..7587)
DNA (1326bp) protein (442aa)
GTPase Der Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=DER_NITMU
engA; GTP-binding protein EngA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1512_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7644..8759)
DNA (1116bp) protein (372aa)
Outer membrane protein assembly factor BamB Tax=Sulfuricella denitrificans skB26 RepID=S6B4W8_9PROT
outer membrane assembly lipoprotein YfgL
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1512_10
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8759..9391)
DNA (633bp) protein (211aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN42_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1512_11
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9388..10662)
DNA (1275bp) protein (425aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase Tax=Aromatoleum aromaticum (strain EbN1) RepID=SYH_AROAE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1512_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10684..11961)
DNA (1278bp) protein (426aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Herbaspirillum sp. JC206 RepID=UPI0002DB4244
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1512_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11971..12777)
DNA (807bp) protein (269aa)
XRE family transcriptional regulator Tax=Sulfuricella denitrificans skB26 RepID=S6AHJ5_9PROT
XRE family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1512_14
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12774..13574)
DNA (801bp) protein (267aa)
Type IV pilus biogenesis/stability protein PilW Tax=Sulfuricella denitrificans skB26 RepID=S6B4X4_9PROT
type IV pilus biogenesis/stability protein PilW
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1512_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13571..14653)
DNA (1083bp) protein (361aa)
50S rRNA methyltransferase Tax=Uliginosibacterium gangwonense RepID=UPI00036AC4BE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1512_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14654..15079)
DNA (426bp) protein (142aa)
nucleoside-diphosphate kinase (EC:2.7.4.6)
nucleoside diphosphate kinase Tax=Herbaspirillum sp. JC206 RepID=UPI0002E42DDA
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_1512_17
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15132..16505)
DNA (1374bp) protein (458aa)
tRNA(Ile)-lysidine synthase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRQ7_SIDLE
tRNA(Ile)-lysidine synthetase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1512_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16474..17358)
DNA (885bp) protein (295aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Nitrosospira sp. APG3 RepID=M5DIX1_9PROT
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_1512_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17440..18066)
DNA (627bp) protein (209aa)
DNA repair protein Tax=Burkholderia bryophila RepID=UPI0003687D03
DNA repair protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_1512_20
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18066..19076)
DNA (1011bp) protein (337aa)
Uncharacterized conserved protein Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUC8_JANMA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR90987.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
PLM3_127_b2_sep16_scaffold_1512_21
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19110..19703)
DNA (594bp) protein (198aa)
HNH endonuclease Tax=Methyloversatilis universalis RepID=UPI00037246A0
putative nuclease
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1512_22
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19820..20656)
DNA (837bp) protein (279aa)
reactivating factor for ethanolamine ammonia lyase Tax=Massilia niastensis RepID=UPI000381C71D
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Displaying 22 items

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