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PLM3_127_b2_sep16_scaffold_8580

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8580_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..268)
DNA (267bp) protein (89aa)
Short-chain dehydrogenase/reductase SDR Tax=Acidovorax sp. (strain JS42) RepID=A1W6C4_ACISJ
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_8580_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272..1408)
DNA (1137bp) protein (379aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGA8_9BACT
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_8580_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1405..3285)
DNA (1881bp) protein (627aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGA9_9BACT
ABC transporter
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_8580_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3298..4053)
DNA (756bp) protein (252aa)
ABC transporter, permease protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGB0_9BACT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_8580_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4050..4415)
DNA (366bp) protein (122aa)
ABC transporter related-protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDV2_9BACT
multidrug ABC transporter ATPase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_8580_6
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4810..5133
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin, iron-sulfur binding protein Tax=Burkholderia glumae (strain BGR1) RepID=C5AD65_BURGB
4Fe-4S binding domain protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_8580_7
unknown

Not on your lists

comp(5114..5734)
DNA (621bp) protein (207aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8580_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6514..8502
DNA (1989bp) protein (663aa)
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9W8_NITMU
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_8580_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8531..8959)
DNA (429bp) protein (143aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI0003647B58
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_8580_10
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9023..9451)
DNA (429bp) protein (143aa)
membrane protein Tax=Methylococcus capsulatus RepID=UPI00030ADD6B
hypothetical protein
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
PLM3_127_b2_sep16_scaffold_8580_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9429..10019)
DNA (591bp) protein (197aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_8580_trna_3
unknown

Not on your lists

comp(10110..10197)
DNA (88bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_8580_trna_2
unknown

Not on your lists

comp(10228..10298)
DNA (71bp)
transferRNA Cys
PLM3_127_b2_sep16_scaffold_8580_trna_1
unknown

Not on your lists

comp(10358..10430)
DNA (73bp)
transferRNA Gly
PLM3_127_b2_sep16_scaffold_8580_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10448..11050)
DNA (603bp) protein (201aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase Tax=Nitrosomonas sp. AL212 RepID=F9ZH93_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_8580_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11040..12533)
DNA (1494bp) protein (498aa)
UvrABC system protein C Tax=Sulfuricella denitrificans skB26 RepID=S6B392_9PROT
UvrABC system protein C
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_8580_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12760..13413)
DNA (654bp) protein (218aa)
Uracil-DNA glycosylase, family 5 Tax=Nitrosospira sp. APG3 RepID=M5DTG3_9PROT
uracil-DNA glycosylase superfamily protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_8580_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13461..14027
DNA (567bp) protein (189aa)
Elongation factor P Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=EFP_NITMU
translation elongation factor P
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
PLM3_127_b2_sep16_scaffold_8580_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14037..14279)
DNA (243bp) protein (81aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI00035E0B86
cation efflux system protein CzcD-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying 19 items

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