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PLM3_127_b2_sep16_scaffold_303

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_303_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35..1159)
DNA (1125bp) protein (375aa)
D-threonine aldolase (EC:4.1.2.42)
D-threonine aldolase Tax=Variovorax paradoxus B4 RepID=T1XJQ4_VARPD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_303_2
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1228..2223
DNA (996bp) protein (332aa)
qor1; NADPH2:quinone reductase (EC:1.6.5.5)
NADPH2:quinone reductase Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUY0_JANMA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_303_3
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2273..3274
DNA (1002bp) protein (334aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZB1_9CHLR
alcohol dehydrogenase
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_303_4
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3319..3711
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Synechocystis sp. PCC 7509 RepID=L8KNF3_9SYNC
Membrane protein {ECO:0000313|EMBL:KIF24156.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
membrane protein
PLM3_127_b2_sep16_scaffold_303_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3789..4352)
DNA (564bp) protein (188aa)
RNA methylase Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U5W9_9CYAN
RNA methylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_303_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4358..5737)
DNA (1380bp) protein (460aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI000370E7D8
amino acid transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_303_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5775..6548)
DNA (774bp) protein (258aa)
spermidine synthase (EC:2.5.1.16)
Spermine synthase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCW0_NITMU
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_303_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6545..7381)
DNA (837bp) protein (279aa)
type 11 methyltransferase bin=bin3_NC10 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
type 11 methyltransferase
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_303_9
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7441..7623)
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Burkholderiaceae RepID=Q0K2B1_CUPNH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EON18338.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
PLM3_127_b2_sep16_scaffold_303_10
unknown

Not on your lists

comp(7562..7843)
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_303_11
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7893..8279)
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Nitrococcus mobilis Nb-231 RepID=A4BUP7_9GAMM
putative dioxygenase
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24081.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
PLM3_127_b2_sep16_scaffold_303_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8291..8935)
DNA (645bp) protein (215aa)
bifunctional pyrazinamidase/nicotinamidase Tax=Bradyrhizobium japonicum RepID=UPI0003663FEA
pncA; bifunctional pyrazinamidase/nicotinamidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_303_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8945..11032)
DNA (2088bp) protein (696aa)
Formate dehydrogenase Tax=Janthinobacterium sp. HH01 RepID=L9PHX8_9BURK
molydopterin dinucleotide binding domain protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_303_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11069..12037)
DNA (969bp) protein (323aa)
Esterase/lipase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase domain-containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_303_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12105..13283)
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V044_VARPE
major facilitator superfamily protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_303_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13496..13759
DNA (264bp) protein (88aa)
Uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
DNA topoisomerase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_127_b2_sep16_scaffold_303_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13908..14393)
DNA (486bp) protein (162aa)
Putative uncharacterized protein Tax=Hydrogenophaga sp. PL2G6 RepID=B4Y347_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_303_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14495..15274)
DNA (780bp) protein (260aa)
Putative hydrolase Tax=Burkholderia graminis C4D1M RepID=B1G5S2_9BURK
alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_303_19
Rhodosporidium toruloides, Rhodosporidium, Sporidiobolales, Microbotryomycetes, Basidiomycota, Fungi

Not on your lists

comp(15318..15761)
DNA (444bp) protein (148aa)
Palmitoyltransferase {ECO:0000256|RuleBase:RU079119}; EC=2.3.1.225 {ECO:0000256|RuleBase:RU079119};; species="Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Rhodosporidium.;" source="Rhodosporidium toruloides (strain NP11) (Yeast) (Rhodotorula; gracilis).;"
Palmitoyltransferase Tax=Rhodosporidium toruloides (strain NP11) RepID=M7XHG5_RHOT1
serine/threonine protein kinase
PLM3_127_b2_sep16_scaffold_303_20
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15775..16185)
DNA (411bp) protein (137aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_303_21
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16262..16783)
DNA (522bp) protein (174aa)
Thiol-disulfide isomerase-like protein Tax=Sulfuricella denitrificans skB26 RepID=S6A9Z6_9PROT
thiol-disulfide isomerase-like protein
Tax=CG_Beta_01
PLM3_127_b2_sep16_scaffold_303_22
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16780..17643)
DNA (864bp) protein (288aa)
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5RER4_9RHOO
putative uncharacterized protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_303_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17640..18383)
DNA (744bp) protein (248aa)
ferredoxin-NADP reductase Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI0003705DCB
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_303_24
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18399..18707)
DNA (309bp) protein (103aa)
Putative uncharacterized protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CG7_DECAR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_303_25
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18817..19809
DNA (993bp) protein (331aa)
hypothetical protein Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0003742284
putative hydrolase protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM3_127_b2_sep16_scaffold_303_26
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(19783..20001)
DNA (219bp) protein (73aa)
id=3731778 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM3_127_b2_sep16_scaffold_303_27
unknown

Not on your lists

comp(20036..20545)
DNA (510bp) protein (170aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_303_28
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20711..20956
DNA (246bp) protein (82aa)
Antitoxin VapB40 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_303_29
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20953..21357
DNA (405bp) protein (135aa)
PilT protein Tax=mine drainage metagenome RepID=T1APU7_9ZZZZ
Conserved protein of unknown function with PIN domain, possible toxin
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_303_30
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21398..30091)
DNA (8694bp) protein (2898aa)
Protein ndvB Tax=Phaeospirillum molischianum DSM 120 RepID=H8FVK9_PHAMO
glycosyltransferase 36 associated family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying items 1-30 of 43 in total

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