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PLM3_127_b2_sep16_scaffold_823

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_823_1
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1206
DNA (1206bp) protein (402aa)
Chromosome partition protein Smc Tax=Burkholderia pseudomallei (strain K96243) RepID=Q63T05_BURPS
chromosome partition protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1209..2252
DNA (1044bp) protein (348aa)
Cell division protein ZipA Tax=Azoarcus sp. KH32C RepID=H0PTY9_9RHOO
zipA; ZipA-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_823_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2252..4354
DNA (2103bp) protein (701aa)
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKG6_ACCPU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_823_4
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4351..5214
DNA (864bp) protein (288aa)
UTP-glucose-1-phosphate uridylyltransferase
UTP-glucose-1-phosphate uridylyltransferase bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5219..5797
DNA (579bp) protein (193aa)
hypoxanthine phosphoribosyltransferase Tax=Thiobacillus thioparus RepID=UPI000372B024
phosphoribosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_823_6
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5804..6541
DNA (738bp) protein (246aa)
Probable 6-oxopurine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
Probable 6-oxopurine nucleoside phosphorylase Tax=Thauera RepID=C4ZPS6_THASP
5'-methylthioadenosine phosphorylase
PLM3_127_b2_sep16_scaffold_823_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6538..7068
DNA (531bp) protein (177aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase Tax=Sulfuricella denitrificans skB26 RepID=S6AH76_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_823_8
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7094..9679)
DNA (2586bp) protein (862aa)
PII uridylyl-transferase Tax=Methyloversatilis universalis RepID=UPI0003723CC0
glnD; PII uridylyl-transferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9684..10445)
DNA (762bp) protein (254aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F94_DECAR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_823_10
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10715..11467
DNA (753bp) protein (251aa)
30S ribosomal protein S2 Tax=Thauera terpenica 58Eu RepID=S9ZGU7_9RHOO
rpsB; 30S ribosomal protein S2
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11541..12449
DNA (909bp) protein (303aa)
Elongation factor Ts Tax=Lautropia mirabilis ATCC 51599 RepID=E7RVY1_9BURK
tsf; elongation factor Ts
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12451..13176
DNA (726bp) protein (242aa)
Uridylate kinase Tax=Limnobacter sp. MED105 RepID=A6GU07_9BURK
uridylate kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13199..13762
DNA (564bp) protein (188aa)
ribosome recycling factor Tax=Leeia oryzae RepID=UPI000378CF85
ribosome recycling factor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_823_14
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13785..14570
DNA (786bp) protein (262aa)
uppS; undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
UDP diphosphate synthase Tax=Azoarcus toluclasticus RepID=UPI000370649B
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_823_15
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14609..15427
DNA (819bp) protein (273aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZH0_AROAE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15424..16623
DNA (1200bp) protein (400aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=DXR_NITEU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_823_17
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16620..17984
DNA (1365bp) protein (455aa)
Peptidase M50, putative membrane-associated zinc metallopeptidase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBA0_NITMU
peptidase M50 membrane-associated zinc metallopeptidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_18
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17996..20269
DNA (2274bp) protein (758aa)
membrane protein Tax=Methyloversatilis sp. NVD RepID=UPI000363ED32
outer membrane protein assembly complex, YaeT protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20304..20837
DNA (534bp) protein (178aa)
Putative outer membrane protein Tax=Azoarcus sp. KH32C RepID=H0Q1U9_9RHOO
putative outer membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_823_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20858..21910
DNA (1053bp) protein (351aa)
UDP-3-O-acylglucosamine N-acyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AH56_9PROT
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_823_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21915..22349
DNA (435bp) protein (145aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=FABZ_POLSJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_823_22
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22346..23116
DNA (771bp) protein (257aa)
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AL94_9PROT
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_823_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23119..24273
DNA (1155bp) protein (385aa)
Lipid-A-disaccharide synthase Tax=Sulfuricella denitrificans skB26 RepID=S6ACB8_9PROT
lipid-A-disaccharide synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_24
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24255..24839
DNA (585bp) protein (195aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII Tax=Azoarcus sp. (strain BH72) RepID=RNH2_AZOSB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_823_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24788..25798)
DNA (1011bp) protein (337aa)
glycosyl transferase Tax=Thiobacillus thioparus RepID=UPI00036FD843
glycosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_823_26
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25818..27113
DNA (1296bp) protein (432aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_823_27
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27110..27913
DNA (804bp) protein (268aa)
tRNA/rRNA methyltransferase SpoU Tax=Sulfuricella denitrificans skB26 RepID=S6AA88_9PROT
tRNA/rRNA methyltransferase SpoU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_823_28
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27888..28727)
DNA (840bp) protein (280aa)
hypothetical protein Tax=Janthinobacterium lividum RepID=UPI000289C382
conserved hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_823_29
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28810..31215
DNA (2406bp) protein (802aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
phosphoenolpyruvate synthase Tax=Methyloversatilis universalis RepID=UPI000381CB03
pps; phosphoenolpyruvate synthase
PLM3_127_b2_sep16_scaffold_823_30
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31216..31662)
DNA (447bp) protein (149aa)
SsrA-binding protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=SSRP_NITMU
smpB; SsrA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Displaying items 1-30 of 35 in total

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