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PLM3_127_b2_sep16_scaffold_835

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_835_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5..463)
DNA (459bp) protein (153aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit Tax=Achromobacter xylosoxidans AXX-A RepID=F7T1C3_ALCXX
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KIO48759.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
PLM3_127_b2_sep16_scaffold_835_2
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(628..1071)
DNA (444bp) protein (148aa)
3-dehydroquinate dehydratase Tax=uncultured bacterium RepID=K2G1Z2_9BACT
3-dehydroquinate dehydratase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_835_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1343..1951)
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P6Y0_AROAE
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2074..3441
DNA (1368bp) protein (456aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase Tax=Sulfuricella denitrificans skB26 RepID=S6A9G4_9PROT
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3438..4004
DNA (567bp) protein (189aa)
Esterase bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
esterase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_835_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4005..5144)
DNA (1140bp) protein (380aa)
L-rhamnonate dehydratase Tax=Burkholderia gladioli (strain BSR3) RepID=F2LED6_BURGS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_835_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5325..7208
DNA (1884bp) protein (628aa)
Ribonuclease II Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK49_ACCPU
ribonuclease II
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7270..8178
DNA (909bp) protein (303aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036D0083
TonB family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8248..8952
DNA (705bp) protein (235aa)
Monofunctional biosynthetic peptidoglycan transglycosylase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMA8_SIDLE
monofunctional biosynthetic peptidoglycan transglycosylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_835_10
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9093..10385)
DNA (1293bp) protein (431aa)
Major facilitator transporter Tax=Sulfuricella denitrificans skB26 RepID=S6ACU0_9PROT
major facilitator transporter
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_835_11
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10585..12018
DNA (1434bp) protein (478aa)
Mg2+ transporter MgtE Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPJ9_AZOSU
Mg2+ transporter MgtE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_835_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12059..13351)
DNA (1293bp) protein (431aa)
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Sulfuricella denitrificans skB26 RepID=S6ADU5_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13358..14017)
DNA (660bp) protein (220aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
thiamine-phosphate pyrophosphorylase Tax=Thiobacillus denitrificans RepID=UPI0003779798
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13992..14804)
DNA (813bp) protein (271aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTH7_SIDLE
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14830..15099
DNA (270bp) protein (90aa)
Rubredoxin Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T2A0_JANMA
rubA; rubredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_835_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15277..15702
DNA (426bp) protein (142aa)
pilus response regulator PilG Tax=Chitiniphilus shinanonensis RepID=UPI000372C80F
response regulator receiver protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15714..16079
DNA (366bp) protein (122aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGJ0_AZOSU
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16092..16616
DNA (525bp) protein (175aa)
CheW protein Tax=Sulfuricella denitrificans skB26 RepID=S6ADU3_9PROT
CheW protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_835_19
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16638..18821
DNA (2184bp) protein (728aa)
Methyl-accepting chemotaxis protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGI8_AZOSU
methyl-accepting chemotaxis protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_835_20
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18848..24100
DNA (5253bp) protein (1751aa)
hypothetical protein Tax=Methylotenera sp. 1P/1 RepID=UPI000367B7CF
response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_835_21
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24181..24741
DNA (561bp) protein (187aa)
UPF0301 protein Slit_2935 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQD9_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_835_22
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24738..25112
DNA (375bp) protein (125aa)
Putative Holliday junction resolvase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFY3_AZOSU
RNAse H-fold protein YqgF
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Displaying 22 items

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