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PLM3_127_b2_sep16_scaffold_875

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_875_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1949
DNA (1947bp) protein (649aa)
oxidoreductase Tax=Bradyrhizobium japonicum RepID=UPI00036A377B
oxidoreductase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_875_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2120..3529)
DNA (1410bp) protein (470aa)
Nitrogen regulation protein NR(I) Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJM8_AZOSU
nitrogen regulation protein NR(I)
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_875_3
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3539..4612)
DNA (1074bp) protein (358aa)
Signal transduction histidine kinase, nitrogen specific Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJM7_AZOSU
signal transduction histidine kinase, nitrogen specific
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_875_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4734..5195)
DNA (462bp) protein (154aa)
Conserved hypothetical secreted protein Tax=Azoarcus sp. (strain BH72) RepID=A1K3E9_AZOSB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_875_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5352..6767)
DNA (1416bp) protein (472aa)
Glutamine synthetase Tax=Ralstonia RepID=D8NUE9_RALSL
glutamine synthetase, type I
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_875_6
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7030..7491
DNA (462bp) protein (154aa)
sulfurtransferase Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036D95FA
rhodanese-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_875_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7508..8332)
DNA (825bp) protein (275aa)
UDP pyrophosphate phosphatase (EC:3.6.1.27)
UDP pyrophosphate phosphatase Tax=Herbaspirillum sp. JC206 RepID=UPI0002EE9053
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_875_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8412..9215)
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W6M3_DESOD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
PLM3_127_b2_sep16_scaffold_875_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9355..11226)
DNA (1872bp) protein (624aa)
phosphomethylpyrimidine synthase ThiC Tax=Herbaspirillum sp. JC206 RepID=UPI0003142006
thiamine biosynthesis protein ThiC
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_875_10
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11413..11841)
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Janthinobacterium sp. HH01 RepID=L9PAZ6_9BURK
sensor histidine kinase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_875_11
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11950..12405
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JMQ9_BURP8
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3_127_b2_sep16_scaffold_875_12
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12419..13015
DNA (597bp) protein (199aa)
OmpA/MotB Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EJ3_DECAR
OmpA/MotB
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3_127_b2_sep16_scaffold_875_13
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13079..15061)
DNA (1983bp) protein (661aa)
Putative chase2 sensor protein Tax=Janthinobacterium sp. HH01 RepID=L9PD84_9BURK
stage II sporulation E family protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM3_127_b2_sep16_scaffold_875_14
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15226..16191)
DNA (966bp) protein (322aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000378C54F
beta-lactamase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3_127_b2_sep16_scaffold_875_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16195..16581)
DNA (387bp) protein (129aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037EF03B
anti-anti-sigma regulatory factor, SpoIIAA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_875_16
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16898..17665
DNA (768bp) protein (256aa)
Protein-L-isoaspartate O-methyltransferase Tax=Nitrosospira sp. APG3 RepID=M5DFJ7_9PROT
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_875_17
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17694..19028
DNA (1335bp) protein (445aa)
Type I secretion outer membrane protein, TolC family Tax=Azoarcus sp. KH32C RepID=H0PT19_9RHOO
TolC family type I secretion outer membrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_875_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19041..20291)
DNA (1251bp) protein (417aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SDY2_GALCS
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_875_19
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20401..20685
DNA (285bp) protein (95aa)
LPS biosynthesis Tax=Burkholderia kururiensis RepID=UPI0003494299
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:BAO31163.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
PLM3_127_b2_sep16_scaffold_875_20
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20776..21846
DNA (1071bp) protein (357aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
dTDP-glucose 4,6-dehydratase Tax=Sulfuricella denitrificans skB26 RepID=S6B8Q0_9PROT
PLM3_127_b2_sep16_scaffold_875_21
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21843..22730
DNA (888bp) protein (296aa)
glucose-1-phosphate thymidylyltransferase Tax=Azoarcus toluclasticus RepID=UPI00037842E3
glucose-1-phosphate thymidylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_875_22
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22727..23272
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Oscillatoria sp. PCC 6506 RepID=D8G1G5_9CYAN
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_875_23
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23269..23604
DNA (336bp) protein (112aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
Uncharacterized protein Tax=uncultured bacterium RepID=K2F5V8_9BACT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_875_24
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23631..24047
DNA (417bp) protein (139aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
DTDP-4-dehydrorhamnose reductase (Fragment) Tax=Burkholderia dolosa AUO158 RepID=A2WC67_9BURK
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
PLM3_127_b2_sep16_scaffold_875_25
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24144..26273
DNA (2130bp) protein (710aa)
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:GAK46167.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Oxidoreductase bin=GWF2_OP9_related_35_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
oxidoreductase domain-containing protein
PLM3_127_b2_sep16_scaffold_875_26
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

26320..27081
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PHE9_9BACT
hypothetical protein
Tax=RBG_16_Armatimonadetes_58_9_curated
PLM3_127_b2_sep16_scaffold_875_27
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27082..28983
DNA (1902bp) protein (634aa)
Asparagine synthetase Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HUI9_CYAP4
Asparagine synthase {ECO:0000313|EMBL:KHD08106.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
asparagine synthase
PLM3_127_b2_sep16_scaffold_875_28
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

28970..29812
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PHF1_9BACT
hypothetical protein
Tax=RBG_16_Armatimonadetes_58_9_curated
PLM3_127_b2_sep16_scaffold_875_29
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

29809..31005
DNA (1197bp) protein (399aa)
hypothetical protein Tax=Paenisporosarcina sp. TG-14 RepID=UPI00031CF2BA
hypothetical protein
Tax=RBG_16_Armatimonadetes_58_9_curated
PLM3_127_b2_sep16_scaffold_875_30
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31002..31829
DNA (828bp) protein (276aa)
Putative methyltransferase Tax=planctomycete KSU-1 RepID=I3IPG4_9PLAN
Tax=BJP_IG2103_Dechloromonas_60_92
Displaying items 1-30 of 54 in total

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