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PLM3_127_b2_sep16_scaffold_2375

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2375_1
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14..913)
DNA (900bp) protein (300aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H932_ANADF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2375_2
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(932..1564)
DNA (633bp) protein (211aa)
TetR family regulatory protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTV5_9BURK
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2375_3
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1597..4446)
DNA (2850bp) protein (950aa)
excinuclease ABC subunit A Tax=Chitiniphilus shinanonensis RepID=UPI00035F01AA
uvrA; excinuclease ABC subunit A
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2375_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4529..5725
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IU2_DECAR
major facilitator transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2375_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5738..6205
DNA (468bp) protein (156aa)
Single-stranded DNA-binding protein Tax=Herbaspirillum sp. CF444 RepID=J3DHJ7_9BURK
Single-stranded DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_2375_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6228..6569
DNA (342bp) protein (114aa)
Putative regulatory protein, FmdB family Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WHI4_VEREI
FmdB family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2375_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6628..7227
DNA (600bp) protein (200aa)
membrane protein Tax=Methylophilus methylotrophus RepID=UPI000371B0BC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2375_8
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7228..9003
DNA (1776bp) protein (592aa)
aspartyl-tRNA synthetase Tax=Herbaspirillum sp. JC206 RepID=UPI0002F7D646
aspartyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_2375_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9021..9326
DNA (306bp) protein (102aa)
guanyl-specific ribonuclease Sa protein (EC:3.1.27.3)
Guanyl-specific ribonuclease Sa protein Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8J1S1_HERSS
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2375_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9323..9739
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0Q426_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2375_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9736..10194
DNA (459bp) protein (153aa)
dihydroneopterin triphosphate pyrophosphatase Tax=Janthinobacterium sp. CG3 RepID=UPI000380F34A
dihydroneopterin triphosphate pyrophosphatase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2375_12
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10191..11708
DNA (1518bp) protein (506aa)
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2375_13
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11705..12454
DNA (750bp) protein (250aa)
Metal-dependent hydrolase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJL9_AZOSU
metal-dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2375_14
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12429..12953)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PRD8_9ZZZZ
2-phosphosulfolactate phosphatase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Displaying 14 items

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