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PLM3_127_b2_sep16_scaffold_2394

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2394_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189..422
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Cupriavidus RepID=Q1LRV2_RALME
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

466..1965
DNA (1500bp) protein (500aa)
Mg chelatase, subunit ChlI Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SI55_GALCS
Mg chelatase subunit ChlI
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1972..3213
DNA (1242bp) protein (414aa)
D-amino-acid dehydrogenase {ECO:0000313|EMBL:KFC67652.1}; EC=1.4.99.1 {ECO:0000313|EMBL:KFC67652.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative D-amino-acid dehydrogenase (DadA-like) (EC:1.4.99.1)
Glycine/D-amino acid oxidase, deaminating Tax=Microvirga sp. WSM3557 RepID=I4YNX2_9RHIZ
PLM3_127_b2_sep16_scaffold_2394_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3213..4028
DNA (816bp) protein (272aa)
biotin transporter BioY Tax=Methyloversatilis universalis RepID=UPI000370E407
symmetrical bis(5'-nucleosyl)-tetraphosphatase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4025..4438
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Thauera sp. 27 RepID=N6YRL1_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4451..4897)
DNA (447bp) protein (149aa)
Outer membrane lipoprotein Tax=Ralstonia sp. PBA RepID=I9BR94_9RALS
outer membrane lipoprotein transmembrane
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4902..5846)
DNA (945bp) protein (315aa)
PfkB Tax=Dechloromonas aromatica (strain RCB) RepID=Q478R8_DECAR
PfkB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5843..6607)
DNA (765bp) protein (255aa)
MJ0042 family finger-like protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPT8_SIDLE
MJ0042 family finger-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2394_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6604..7428)
DNA (825bp) protein (275aa)
Ribosomal protein L11 methyltransferase Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6D6_9NEIS
prmA; ribosomal protein L11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7428..8789)
DNA (1362bp) protein (454aa)
accC; biotin carboxylase (EC:6.3.4.14)
Acetyl-CoA carboxylase subunit A Tax=Methyloversatilis universalis FAM5 RepID=F5RCS6_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8838..9293)
DNA (456bp) protein (152aa)
acetyl-CoA carboxylase Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003821155
biotin carboxyl carrier protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9303..9764)
DNA (462bp) protein (154aa)
3-dehydroquinate dehydratase Tax=Methyloversatilis sp. NVD RepID=UPI0003637399
3-dehydroquinate dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9788..10312)
DNA (525bp) protein (175aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI0003686884
Cytochrome c-type biogenesis protein ResA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2394_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10293..10907)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Azoarcus sp. (strain BH72) RepID=A1K3S9_AZOSB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2394_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10944..12308
DNA (1365bp) protein (455aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12305..12868
DNA (564bp) protein (188aa)
Esterase Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFS9_THIDA
esterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2394_17
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12852..14744
DNA (1893bp) protein (631aa)
Exoribonuclease R Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPK4_AZOSU
exoribonuclease R
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2394_18
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14770..15645
DNA (876bp) protein (292aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI00037AB332
TonB family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2394_19
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15642..16253
DNA (612bp) protein (204aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=AROE_CHRVO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying 19 items

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