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PLM3_127_b2_sep16_scaffold_2488

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2488_1
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..724)
DNA (723bp) protein (241aa)
NADH dehydrogenase Tax=Caldimonas manganoxidans RepID=UPI00037260A4
NADH-quinone oxidoreductase chain F
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2488_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(724..1197)
DNA (474bp) protein (158aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase subunit E Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA23_NITMU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2488_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1197..2450)
DNA (1254bp) protein (418aa)
nuoD; NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH dehydrogenase subunit D Tax=Thiobacillus thioparus RepID=UPI000382DA3E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
PLM3_127_b2_sep16_scaffold_2488_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2443..3015)
DNA (573bp) protein (191aa)
NADH dehydrogenase subunit C Tax=Thiobacillus denitrificans RepID=UPI00036A6749
NADH-quinone oxidoreductase subunit C
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2488_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3024..3500)
DNA (477bp) protein (159aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B Tax=Burkholderiaceae RepID=NUOB_CUPPJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2488_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3511..3867)
DNA (357bp) protein (119aa)
NADH:ubiquinone oxidoreductase subunit A Tax=Aquaspirillum serpens RepID=UPI0003B5C1E5
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2488_trna_1
unknown

Not on your lists

comp(3876..3960)
DNA (85bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_2488_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3986..4342)
DNA (357bp) protein (119aa)
Preprotein translocase SecG subunit Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPG0_RUBGI
secG; preprotein translocase subunit SecG
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2488_8
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4339..5070)
DNA (732bp) protein (244aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase Tax=Sulfuricella denitrificans skB26 RepID=S6B296_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2488_9
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5129..6160
DNA (1032bp) protein (344aa)
TRAP dicarboxylate transporter subunit DctP Tax=Thalassospira profundimaris WP0211 RepID=K2LX17_9PROT
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJE36200.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
extracellular solute-binding protein, family 7
PLM3_127_b2_sep16_scaffold_2488_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6221..6802
DNA (582bp) protein (194aa)
TRAP-type mannitol/chloroaromatic compound transporter small permease Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXQ6_PUSST
TRAP-type mannitol/chloroaromatic compound transporter small permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_2488_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6799..8187
DNA (1389bp) protein (463aa)
Enoyl-CoA hydratase Tax=Oceanibaculum indicum P24 RepID=K2JBU4_9PROT
enoyl-CoA hydratase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_2488_12
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8180..9100)
DNA (921bp) protein (307aa)
Candidate pyruvate dehydrogenase E1 component, beta subunit Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y6I0_RAMTT
pdhB; pyruvate dehydrogenase E1 component subunit beta
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_2488_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9100..10086)
DNA (987bp) protein (329aa)
Candidate pyruvate dehydrogenase E1 component, alpha subunit Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y6I1_RAMTT
pdhA; pyruvate dehydrogenase E1 component subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2488_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10135..11757
DNA (1623bp) protein (541aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0003795B7A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2488_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11754..12533)
DNA (780bp) protein (260aa)
Phosphoglucosamine mutase Tax=Nitrosospira sp. APG3 RepID=M5DGP6_9PROT
phosphoglucosamine mutase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying 16 items

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