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PLM3_127_b2_sep16_scaffold_2689

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2689_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145..603
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEX2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

600..926
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A2G4_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_3
unknown

Not on your lists

comp(923..1249)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2689_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1277..1900
DNA (624bp) protein (208aa)
cho; excinuclease complex nuclease subunit Cho (EC:3.1.25.-)
DNA-directed DNA polymerase III subunit epsilon Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1BQY1_9NEIS
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1900..2877
DNA (978bp) protein (326aa)
Regulatory protein, RpfE type Tax=Nitrosospira sp. APG3 RepID=M5DLX1_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2689_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2874..4535
DNA (1662bp) protein (554aa)
Exonuclease RecJ Tax=Dechloromonas aromatica (strain RCB) RepID=Q47C63_DECAR
RecJ exonuclease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4532..5356
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN21_RHOCS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5353..5721
DNA (369bp) protein (123aa)
hypothetical protein Tax=Streptomyces purpureus RepID=UPI000379FC90
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2689_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5721..5930
DNA (210bp) protein (70aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0PYK8_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6060..6440
DNA (381bp) protein (127aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6756..7547
DNA (792bp) protein (264aa)
Peptide chain release factor 2 Tax=Aromatoleum aromaticum (strain EbN1) RepID=RF2_AROAE
peptide chain release factor 2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7548..8999
DNA (1452bp) protein (484aa)
lysyl-tRNA synthetase, class-2; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
lysyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9098..9697
DNA (600bp) protein (200aa)
hypothetical protein Tax=Janthinobacterium lividum RepID=UPI0002881E1A
surface antigen family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9694..10518)
DNA (825bp) protein (275aa)
membrane protein Tax=Stenotrophomonas maltophilia RepID=UPI00031237AB
transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10524..11354)
DNA (831bp) protein (277aa)
Patatin Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCP9_NITMU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11385..11672
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Gloeobacter kilaueensis JS1 RepID=U5QNV8_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2689_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11665..12912)
DNA (1248bp) protein (416aa)
Putative uncharacterized protein Tax=sulfur-oxidizing symbionts RepID=G2DBI9_9GAMM
peptidase M48 Ste24p
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12923..15580)
DNA (2658bp) protein (886aa)
Lon protease Tax=Azoarcus sp. KH32C RepID=H0Q5X1_9RHOO
lon_capR; ATP-dependent protease La
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15612..16550)
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVD1_ACCPU
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_20
unknown

Not on your lists

16641..16814
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2689_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16807..16980
DNA (174bp) protein (58aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_22
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17094..17636)
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G672_9PSEU
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
PLM3_127_b2_sep16_scaffold_2689_23
unknown

Not on your lists

comp(17681..17833)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2689_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17830..19014)
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
3-ketoacyl-CoA thiolase Tax=Caenispirillum salinarum AK4 RepID=K9GRX2_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_25
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19011..20045)
DNA (1035bp) protein (345aa)
Ribosomal protein S12 methylthiotransferase RimO Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RIMO_NITMU
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_2689_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20293..20874)
DNA (582bp) protein (194aa)
polyhydroxyalkanoate synthesis repressor PhaR Tax=Rhodocyclaceae RepID=UPI000362D252
phbF; hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20887..21633)
DNA (747bp) protein (249aa)
Acetoacetyl-CoA reductase (EC:1.1.1.36)
Acetoacetyl-CoA reductase Tax=Delftia acidovorans CCUG 274B RepID=S2WTZ7_DELAC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_28
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21660..22451)
DNA (792bp) protein (264aa)
3-ketoacyl-ACP reductase (EC:1.1.1.36)
Acetoacetyl-CoA reductase Tax=Herbaspirillum sp. CF444 RepID=J3DJ53_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_2689_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22448..23623)
DNA (1176bp) protein (392aa)
phaA; acetyl-CoA acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000376F5AA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_2689_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23632..25233)
DNA (1602bp) protein (534aa)
Poly(R)-hydroxyalkanoic acid synthase, class I Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FM4_DECAR
Poly(R)-hydroxyalkanoic acid synthase, class I
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying items 1-30 of 42 in total

View Taxonomy