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PLM3_127_b2_sep16_scaffold_3232

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3232_1
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y364_RAMTT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_3232_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(570..1088)
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML23_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69865.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b2_sep16_scaffold_3232_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1085..2179)
DNA (1095bp) protein (365aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4YFB4_SORCE
hypothetical protein
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_127_b2_sep16_scaffold_3232_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2172..3095)
DNA (924bp) protein (308aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinoline quinone biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y9K0_SORCE
hypothetical protein
PLM3_127_b2_sep16_scaffold_3232_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3092..3847)
DNA (756bp) protein (252aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037E0E19
hypothetical protein
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_127_b2_sep16_scaffold_3232_6
unknown

Not on your lists

comp(4004..4102)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3232_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4230..5447
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI000371AA34
glucose/sorbosone dehydrogenase-like protein
Glucose/sorbosone dehydrogenase-like protein {ECO:0000313|EMBL:EIK92683.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PLM3_127_b2_sep16_scaffold_3232_8
Halomonas huangheensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5448..5969
DNA (522bp) protein (174aa)
hypothetical protein Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AED33D
Uncharacterized protein {ECO:0000313|EMBL:ERL50160.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheensis.;"
cytochrome c4
PLM3_127_b2_sep16_scaffold_3232_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5920..8610)
DNA (2691bp) protein (897aa)
acnA; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase Tax=Ralstonia pickettii DTP0602 RepID=U3QQ07_RALPI
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_3232_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8640..8963)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSV4_ACCPU
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_3232_11
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9053..10483)
DNA (1431bp) protein (477aa)
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase Tax=Cupriavidus basilensis OR16 RepID=H1S646_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_3232_12
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10483..10683)
DNA (201bp) protein (67aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI0003829FB5
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_3232_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10686..11831)
DNA (1146bp) protein (382aa)
Citrate synthase Tax=Burkholderia cenocepacia RepID=B4EKX1_BURCJ
2-methylcitrate synthase/citrate synthase II family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_3232_14
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11809..12681)
DNA (873bp) protein (291aa)
prpB; 2-methylisocitrate lyase (EC:4.1.3.30)
2-methylisocitrate lyase Tax=Ralstonia solanacearum CMR15 RepID=D8NAP4_RALSL
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_3232_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12678..13667)
DNA (990bp) protein (330aa)
mdh; malate dehydrogenase (EC:1.1.1.37)
malate dehydrogenase Tax=Chitiniphilus shinanonensis RepID=UPI0003779DDA
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_3232_16
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13747..14151
DNA (405bp) protein (135aa)
sdhC; succinate dehydrogenase cytochrome b-556 subunit (EC:1.3.99.1)
Succinate dehydrogenase cytochrome b-556 subunit (EC 1.3.99.1) Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYB2_AROAE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_3232_17
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14145..14489
DNA (345bp) protein (115aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJV1_AZOSU
succinate dehydrogenase, hydrophobic membrane anchor protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_3232_18
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14486..16267
DNA (1782bp) protein (594aa)
Succinate dehydrogenase flavoprotein subunit Tax=Nitrosospira sp. APG3 RepID=M5DGX8_9PROT
succinate dehydrogenase or fumarate reductase, flavoprotein subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_3232_19
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16267..16497
DNA (231bp) protein (77aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
succinate dehydrogenase iron-sulfur subunit Tax=Chitiniphilus shinanonensis RepID=UPI00036004D9
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_3232_20
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16494..16943
DNA (450bp) protein (150aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
Succinate dehydrogenase and fumarate reductase iron-sulfur protein Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFR3_GALCS
PLM3_127_b2_sep16_scaffold_3232_21
unknown

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16940..17047
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 21 items

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