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PLM3_127_b2_sep16_scaffold_6094

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6094_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1250)
DNA (1248bp) protein (416aa)
RNA polymerase sigma factor RpoD Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLL9_AZOSU
rpoD; RNA polymerase sigma factor rpoD, Sigma-70
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6094_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1290..2447)
DNA (1158bp) protein (386aa)
DNA primase Tax=Sulfuricella denitrificans skB26 RepID=S6AAU9_9PROT
DNA primase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6094_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2905..3321)
DNA (417bp) protein (139aa)
Putative uncharacterized protein bin=GWB2_Geobacter-like_52_12 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_6094_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3353..3565)
DNA (213bp) protein (71aa)
30S ribosomal protein S21 Tax=Leeia oryzae RepID=UPI00036C366A
rpsU; 30S ribosomal protein S21
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6094_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3613..4605
DNA (993bp) protein (331aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Herbaspirillum sp. CF444 RepID=J2LKB4_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6094_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4574..5188)
DNA (615bp) protein (205aa)
Glycerol-3-phosphate acyltransferase Tax=blood disease bacterium R229 RepID=G2ZKW6_9RALS
glycerol-3-phosphate acyltransferase PlsY
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6094_7
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5218..5574
DNA (357bp) protein (119aa)
Dihydroneopterin aldolase Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIX3_GALCS
dihydroneopterin aldolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_127_b2_sep16_scaffold_6094_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5577..6476)
DNA (900bp) protein (300aa)
Tyrosine recombinase XerD bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
xerD; tyrosine recombinase XerD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6094_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6425..6907)
DNA (483bp) protein (161aa)
methylated-DNA--[]-cysteine S-methyltransferase family protein (EC:2.1.1.63)
hypothetical protein Tax=Burkholderia sp. JPY347 RepID=UPI00035E749D
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_6094_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6895..7896)
DNA (1002bp) protein (334aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036C2534
malate/L-lactate dehydrogenase
Tax=CG_Rhodocyc_01
PLM3_127_b2_sep16_scaffold_6094_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7913..8581
DNA (669bp) protein (223aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase Tax=Variovorax paradoxus (strain EPS) RepID=E6VBG4_VARPE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6094_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8578..9186)
DNA (609bp) protein (203aa)
aldehyde dehydrogenase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289EC22
thiamine pyrophosphate binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_6094_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9183..9713)
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QNA7_RALPI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_6094_14
unknown

Not on your lists

comp(9703..9768)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 14 items

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