ggKbase home page

PLM3_127_b2_sep16_scaffold_4233

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4233_1
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1329)
DNA (1329bp) protein (443aa)
PII uridylyl-transferase Tax=Methyloversatilis universalis RepID=UPI0003723CC0
glnD; PII uridylyl-transferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4233_2
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1319..2080)
DNA (762bp) protein (254aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4233_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2248..2997
DNA (750bp) protein (250aa)
30S ribosomal protein S2 Tax=Nitrosospira sp. APG3 RepID=M5DFW0_9PROT
rpsB; 30S ribosomal protein S2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_4233_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3068..3883
DNA (816bp) protein (272aa)
Elongation factor Ts Tax=Sulfuricella denitrificans skB26 RepID=S6AA92_9PROT
translation elongation factor Ts
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_4233_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3894..4607
DNA (714bp) protein (238aa)
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase Tax=Herbaspirillum sp. YR522 RepID=J2VKI2_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_4233_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4630..5190
DNA (561bp) protein (187aa)
Ribosome recycling factor (Ribosome-releasing factor) (RRF) Tax=mine drainage metagenome RepID=E6PS41_9ZZZZ
ribosome-recycling factor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_4233_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5187..5951
DNA (765bp) protein (255aa)
Isoprenyl transferase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPD9_AZOSU
undecaprenyl diphosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4233_8
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6044..6739
DNA (696bp) protein (232aa)
Phosphatidate cytidylyltransferase Tax=Thauera RepID=C4ZPR7_THASP
phosphatidate cytidylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4233_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6736..7893
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Ralstonia RepID=E2T271_9RALS
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_4233_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7890..9254
DNA (1365bp) protein (455aa)
peptidase M50 membrane-associated zinc metallopeptidase; K11749 regulator of sigma E protease [EC:3.4.24.-] bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
peptidase M50 membrane-associated zinc metallopeptidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_4233_11
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9266..10822
DNA (1557bp) protein (519aa)
membrane protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003760107
outer membrane protein assembly complex, YaeT protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Displaying 11 items

View Taxonomy