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PLM3_127_b2_sep16_scaffold_4374

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4374_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1275
DNA (1275bp) protein (425aa)
isoquinoline 1-oxidoreductase (EC:1.3.99.16)
Isoquinoline 1-oxidoreductase Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q07GL3_ROSDO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_4374_2
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1272..2051)
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XQV0_9RHIZ
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4374_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2068..2790
DNA (723bp) protein (241aa)
Probable transcriptional regulatory protein EBAPG3_9170 Tax=Nitrosospira sp. APG3 RepID=M5DHP1_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_4374_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2853..3302
DNA (450bp) protein (150aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_4374_5
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3299..3862
DNA (564bp) protein (188aa)
Holliday junction ATP-dependent DNA helicase RuvA Tax=Aromatoleum aromaticum (strain EbN1) RepID=RUVA_AROAE
ruvA; Holliday junction DNA helicase RuvA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4374_6
unknown

Not on your lists

3926..4420
DNA (495bp) protein (165aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4374_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4527..5474
DNA (948bp) protein (316aa)
MORN motif-containing protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289F92B
hypothetical protein
Tax=CG_Rhodocyc_01
PLM3_127_b2_sep16_scaffold_4374_8
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5506..6543
DNA (1038bp) protein (346aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4374_9
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6540..6926
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Bordetella bronchiseptica RepID=K0MMM3_BORBM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4374_10
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6923..7603
DNA (681bp) protein (227aa)
Protein TolQ Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPG3_ACCPU
protein TolQ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4374_11
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7631..8029
DNA (399bp) protein (133aa)
Protein TolR Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMS2_SIDLE
protein TolR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4374_12
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8036..8764
DNA (729bp) protein (243aa)
Cell division and transport-associated protein TolA Tax=Dechloromonas aromatica (strain RCB) RepID=Q478F1_DECAR
TonB, C-terminal
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4374_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8761..9135
DNA (375bp) protein (125aa)
Protein TolB Tax=Sulfuricella denitrificans skB26 RepID=S6ABB2_9PROT
tolB; translocation protein TolB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying 13 items

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