ggKbase home page

PLM3_127_b2_sep16_scaffold_7276

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7276_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..336
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PNM1_9ACTO
MarR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_7276_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

333..1277
DNA (945bp) protein (315aa)
fabK; 2-nitropropane dioxygenase (EC:1.13.12.16)
Oxidoreductase, 2-nitropropane dioxygenase family protein Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZW58_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_7276_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1274..1987
DNA (714bp) protein (238aa)
Enoyl-CoA hydratase family protein Tax=Achromobacter xylosoxidans AXX-A RepID=F7SVI2_ALCXX
enoyl-CoA hydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_7276_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1987..3120
DNA (1134bp) protein (378aa)
III protein, CoA-transferase family Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZW60_9PROT
acyl-CoA transferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_7276_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3117..3836
DNA (720bp) protein (240aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.55)
Enoyl-CoA hydratase/isomerase family protein Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZW61_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_7276_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3833..5308
DNA (1476bp) protein (492aa)
Fatty-acid-CoA ligase Tax=Achromobacter xylosoxidans C54 RepID=E5U4E5_ALCXX
Long-chain-fatty-acid--CoA ligase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_7276_7
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5305..5490
DNA (186bp) protein (62aa)
id=3730935 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_127_b2_sep16_scaffold_7276_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5576..6565
DNA (990bp) protein (330aa)
ABC transporter substrate-binding protein Tax=Bradyrhizobium japonicum RepID=UPI00037F187F
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_7276_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6562..6774)
DNA (213bp) protein (71aa)
Putative amidohydrolase Tax=uncultured marine microorganism HF4000_137B17 RepID=B3T266_9ZZZZ
putative hydrolase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_7276_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6932..7876
DNA (945bp) protein (315aa)
TPR repeat Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BU0_POLSJ
hypothetical protein
TPR repeat {ECO:0000313|EMBL:ABE44002.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM3_127_b2_sep16_scaffold_7276_11
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7876..8190
DNA (315bp) protein (105aa)
TPR repeat Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BU0_POLSJ
hypothetical protein
TPR repeat {ECO:0000313|EMBL:ABE44002.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM3_127_b2_sep16_scaffold_7276_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8208..8420)
DNA (213bp) protein (71aa)
Putative amidohydrolase Tax=uncultured marine microorganism HF4000_137B17 RepID=B3T266_9ZZZZ
putative hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_7276_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9198..9572)
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Pseudomonas fluorescens SS101 RepID=I4KEF8_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK63098.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
PLM3_127_b2_sep16_scaffold_7276_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9565..9795)
DNA (231bp) protein (77aa)
bifunctional enzyme with isomerase/decarboxylase activity (EC:4.1.1.68 5.3.3.10)
Putative bifunctional enzyme with isomerase/decarboxylase activity Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YY37_BRASO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying 14 items

View Taxonomy