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PLM3_127_b2_sep16_scaffold_482

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_482_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..984
DNA (984bp) protein (328aa)
FAD/FMN-dependent dehydrogenase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNZ3_AZOSU
FAD/FMN-dependent dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

981..1478
DNA (498bp) protein (166aa)
Endoribonuclease L-PSP Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4E9_THERP
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1475..1984)
DNA (510bp) protein (170aa)
oligoribonuclease Tax=beta proteobacterium L13 RepID=UPI000372C26A
exonuclease RNase T and DNA polymerase III
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2023..3297
DNA (1275bp) protein (425aa)
Peptidase M48, Ste24p Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BP9_DECAR
peptidase M48, Ste24p
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3314..3643
DNA (330bp) protein (110aa)
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Nitrosomonas sp. AL212 RepID=F9ZD85_9PROT
transcriptional coactivator/pterin dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_482_6
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3954..4814
DNA (861bp) protein (287aa)
hypothetical protein SclubSA_08102 bin=GWF2_Planctomycetes_42_9 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM3_127_b2_sep16_scaffold_482_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4819..5724)
DNA (906bp) protein (302aa)
Cobalamin biosynthesis protein CobD Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJA3_AZOSU
cobalamin biosynthesis protein cobD/CbiB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5734..6357)
DNA (624bp) protein (208aa)
NUDIX hydrolase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNV5_ACCPU
NUDIX hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_9
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6451..6690
DNA (240bp) protein (80aa)
signal peptide protein Tax=Rhizobium sp. (strain BR816) RepID=UPI000366BA80
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6700..7671)
DNA (972bp) protein (324aa)
NADPH:quinone oxidoreductase Tax=Herbaspirillum sp. GW103 RepID=I3CQI6_9BURK
NADPH:quinone oxidoreductase-like zinc-containing oxidoreductase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_482_11
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7685..7939)
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Thauera sp. 63 RepID=N6XF93_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_12
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7932..9125)
DNA (1194bp) protein (398aa)
Putative esterase Tax=Methyloversatilis universalis FAM5 RepID=F5R7W2_9RHOO
putative esterase of the alpha-beta hydrolase superfamily
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_13
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9129..11423)
DNA (2295bp) protein (765aa)
malic enzyme (EC:2.3.1.8)
Malic enzyme Tax=Burkholderia cepacia GG4 RepID=J7JAA9_BURCE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11448..12593
DNA (1146bp) protein (382aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0PRY5_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12602..13423)
DNA (822bp) protein (274aa)
Transglycosylase Tax=Azoarcus sp. KH32C RepID=H0PRY4_9RHOO
mltE; transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_482_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13690..13968)
DNA (279bp) protein (93aa)
Histone H1-like protein Tax=Burkholderia RepID=I5CCY6_9BURK
putative histone H1/H5 family protein, HCT subfamily
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_17
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14024..14332)
DNA (309bp) protein (103aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_18
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14334..15464)
DNA (1131bp) protein (377aa)
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta Tax=Nitrosospira sp. APG3 RepID=M5DLC5_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_482_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15461..18307)
DNA (2847bp) protein (949aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y664_NITMU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18545..19078)
DNA (534bp) protein (178aa)
ampD2; N-acetyl-anhydromuranmyl-L-alanine amidase (EC:3.5.1.28)
N-acetyl-anhydromuranmyl-L-alanine amidase Tax=Methyloversatilis sp. NVD RepID=UPI00037E90CC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_21
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19062..20474)
DNA (1413bp) protein (471aa)
Helix-turn-helix, Fis-type Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IB3_DECAR
two component sigma-54 specific Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_22
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20471..22069)
DNA (1599bp) protein (533aa)
Multi-sensor signal transduction histidine kinase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNH6_ACCPU
histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22069..22314)
DNA (246bp) protein (82aa)
Putative membrane protein Tax=Pseudomonas putida S610 RepID=V6JJ44_PSEPU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_482_trna_2
unknown

Not on your lists

comp(22347..22420)
DNA (74bp)
transferRNA Pro
PLM3_127_b2_sep16_scaffold_482_24
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22434..23399)
DNA (966bp) protein (322aa)
Geranylgeranyl pyrophosphate synthase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM66_AZOSU
geranylgeranyl pyrophosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_25
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23445..23759
DNA (315bp) protein (105aa)
50S ribosomal protein L21 Tax=Laribacter hongkongensis (strain HLHK9) RepID=RL21_LARHH
rplU; 50S ribosomal protein L21
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23764..24033
DNA (270bp) protein (90aa)
50S ribosomal protein L27 Tax=Leeia oryzae RepID=UPI000366C1B2
50S ribosomal protein L27
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24094..25083
DNA (990bp) protein (330aa)
GTPase Obg Tax=Sulfuricella denitrificans skB26 RepID=S6ACW1_9PROT
obgE; GTP-binding protein Obg/CgtA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_482_28
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25080..26192
DNA (1113bp) protein (371aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase Tax=Sulfuricella denitrificans skB26 RepID=S6AMB0_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_482_29
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26189..26680)
DNA (492bp) protein (164aa)
Putative lipoprotein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJS8_THIDA
lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying items 1-30 of 45 in total

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