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PLM3_127_b2_sep16_scaffold_5677

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5677_1
unknown

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comp(1..189)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5677_2
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(242..2236)
DNA (1995bp) protein (665aa)
Conserved repeat domain Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A9A0P1_DESOH
hypothetical protein
Conserved repeat domain {ECO:0000313|EMBL:ABW69058.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
PLM3_127_b2_sep16_scaffold_5677_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2426..2824)
DNA (399bp) protein (133aa)
Cytochrome c class I Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J564_HYPSM
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:CCB64584.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM3_127_b2_sep16_scaffold_5677_4
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3156..3641
DNA (486bp) protein (162aa)
hypothetical protein Tax=Burkholderia sp. WSM4176 RepID=UPI00037EC4FC
Uncharacterized protein {ECO:0000313|EMBL:KDR37721.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_5677_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3954..4862
DNA (909bp) protein (303aa)
Coenzyme PQQ synthesis protein B Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWK1_RUBGI
pqqB; coenzyme PQQ biosynthesis protein B PqqB
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_5677_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4859..5572
DNA (714bp) protein (238aa)
pyrroloquinoline quinone biosynthesis protein PqqC (EC:1.3.3.11)
Pyrroloquinoline-quinone synthase Tax=Variovorax paradoxus (strain S110) RepID=C5CPT5_VARPS
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_5677_7
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5569..5847
DNA (279bp) protein (93aa)
Coenzyme PQQ synthesis protein D Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWK3_RUBGI
pqqD; coenzyme PQQ synthesis D PqqD
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_5677_8
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5826..6971
DNA (1146bp) protein (382aa)
Coenzyme PQQ synthesis protein E Tax=Hydrocarboniphaga effusa AP103 RepID=I8HZH4_9GAMM
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
pqqE; pyrroloquinoline quinone biosynthesis protein PqqE
PLM3_127_b2_sep16_scaffold_5677_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6968..7900
DNA (933bp) protein (311aa)
ABC transporter related protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1I6_NITHN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETX06870.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ABC transporter
PLM3_127_b2_sep16_scaffold_5677_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8162..8560
DNA (399bp) protein (133aa)
ABC-2 type transporter Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1I7_NITHN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
multidrug ABC transporter
PLM3_127_b2_sep16_scaffold_5677_11

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8624..9091
DNA (468bp) protein (156aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Dihydrofolate reductase Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2KEL2_9GAMM
dihydrofolate reductase type 3
PLM3_127_b2_sep16_scaffold_5677_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9088..10182
DNA (1095bp) protein (365aa)
Putrescine-binding periplasmic protein Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K059_PSEPS
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJH79721.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
spermidine/putrescine ABC transporter substrate-binding protein
Displaying 12 items

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