ggKbase home page

PLM3_127_b2_sep16_scaffold_10002

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_10002_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2..1534)
DNA (1533bp) protein (511aa)
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I8T529_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDM65799.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_10002_2

Not on your lists

1863..2951
DNA (1089bp) protein (363aa)
Glycine cleavage system aminomethyltransferase T Tax=sediment metagenome RepID=D9PNF5_9ZZZZ
Glycine cleavage system aminomethyltransferase T {ECO:0000313|EMBL:EFK94910.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
glycine cleavage system aminomethyltransferase T
PLM3_127_b2_sep16_scaffold_10002_3
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2948..3343
DNA (396bp) protein (132aa)
Glycine cleavage system H protein Tax=Thioflavicoccus mobilis 8321 RepID=L0GYJ4_9GAMM
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
PLM3_127_b2_sep16_scaffold_10002_4

Not on your lists

3343..4716
DNA (1374bp) protein (458aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Glycine dehydrogenase subunit 1 Tax=sediment metagenome RepID=D9PNF7_9ZZZZ
Glycine dehydrogenase subunit 1 {ECO:0000313|EMBL:EFK94912.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
PLM3_127_b2_sep16_scaffold_10002_5

Not on your lists

4713..5504
DNA (792bp) protein (264aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
glycine dehydrogenase subunit 2 Tax=Singularimonas variicoloris RepID=UPI0003684A15
Glycine dehydrogenase subunit 2 {ECO:0000313|EMBL:EFK94913.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
PLM3_127_b2_sep16_scaffold_10002_6
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5501..5713
DNA (213bp) protein (71aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
glycine dehydrogenase (EC:1.4.4.2)
glycine dehydrogenase Tax=Nevskia ramosa RepID=UPI0003B435AF
Displaying 6 items

View Taxonomy