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PLM3_127_b2_sep16_scaffold_2668

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2668_1
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..503)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Alcanivorax pacificus W11-5 RepID=K2GI12_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD47462.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
PLM3_127_b2_sep16_scaffold_2668_2
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(787..1293)
DNA (507bp) protein (169aa)
hypothetical protein Tax=Hymenobacter aerophilus RepID=UPI00038212F3
Putative PRS2 protein {ECO:0000313|EMBL:KIG13147.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2668_3
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

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1322..1852
DNA (531bp) protein (177aa)
Putative uncharacterized protein Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2U312_SALR5
Putative uncharacterized protein {ECO:0000313|EMBL:EGD82006.1}; species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2668_4
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1938..2621
DNA (684bp) protein (228aa)
OmpA/MotB domain protein Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ABV4_ALKEH
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ABI55683.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
PLM3_127_b2_sep16_scaffold_2668_5
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2763..3647)
DNA (885bp) protein (295aa)
RNA polymerase sigma 70 Tax=Halomonas sp. KM-1 RepID=UPI00028A1455
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
RNA polymerase sigma-32 subunit RpoH
PLM3_127_b2_sep16_scaffold_2668_6
unknown

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3843..4055
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2668_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4096..5235
DNA (1140bp) protein (380aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2JM86_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE76443.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
heat shock protein
PLM3_127_b2_sep16_scaffold_2668_8
unknown

Not on your lists

comp(5373..5825)
DNA (453bp) protein (151aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2668_9
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5846..6775)
DNA (930bp) protein (310aa)
Cell division protein FtsX Tax=Thiocapsa marina 5811 RepID=F9UCK7_9GAMM
Cell division protein {ECO:0000313|EMBL:AKH20659.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2668_10
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6819..7490)
DNA (672bp) protein (224aa)
Cell division transporter ATP-binding protein FtsE Tax=Methylophaga lonarensis MPL RepID=M7PGM6_9GAMM
Cell division transporter ATP-binding protein FtsE {ECO:0000313|EMBL:EMR13050.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
ftsE; cell division ATP-binding protein FtsE
PLM3_127_b2_sep16_scaffold_2668_11
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7487..8470)
DNA (984bp) protein (328aa)
Signal recognition particle receptor FtsY Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YFT6_METFJ
Signal recognition particle receptor protein FtsY (alpha subunit)
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
PLM3_127_b2_sep16_scaffold_2668_12
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8558..10753)
DNA (2196bp) protein (732aa)
Extracellular lipase, Pla-1/cef family Tax=Thiothrix nivea DSM 5205 RepID=I3BUP7_9GAMM
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
PLM3_127_b2_sep16_scaffold_2668_13
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10876..11520
DNA (645bp) protein (215aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
Methyltransferase Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6S3_NITWC
methyltransferase
PLM3_127_b2_sep16_scaffold_2668_14

Not on your lists

11517..11999
DNA (483bp) protein (161aa)
Coenzyme A biosynthesis protein {ECO:0000313|EMBL:EQD50474.1}; EC=2.7.7.3 {ECO:0000313|EMBL:EQD50474.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Coenzyme A biosynthesis protein Tax=mine drainage metagenome RepID=T1BBV9_9ZZZZ
pantetheine-phosphate adenylyltransferase
PLM3_127_b2_sep16_scaffold_2668_15
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12115..13524
DNA (1410bp) protein (470aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACL71399.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACL71399.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
gamma-glutamyltransferase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035F18C0
PLM3_127_b2_sep16_scaffold_2668_16
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13448..14239)
DNA (792bp) protein (264aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
DNA-formamidopyrimidine glycosylase (Fragment) Tax=mine drainage metagenome RepID=T1BSQ7_9ZZZZ
Tax=BJP_08E140C01_Xanthomonadales_64_42
PLM3_127_b2_sep16_scaffold_2668_17
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14429..15613
DNA (1185bp) protein (395aa)
Fatty acid desaturase Tax=Thiorhodococcus drewsii AZ1 RepID=G2E772_9GAMM
Fatty acid desaturase {ECO:0000313|EMBL:CDI01215.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
fatty-acid desaturase
PLM3_127_b2_sep16_scaffold_2668_18
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15725..15880)
DNA (156bp) protein (52aa)
50S ribosomal protein L33 Tax=Alcanivorax RepID=RL33_ALCBS
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax jadensis T9.;"
PLM3_127_b2_sep16_scaffold_2668_19
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15893..16129)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI0002888407
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. JCM 18903.;"
rpmB; 50S ribosomal protein L28
PLM3_127_b2_sep16_scaffold_2668_20
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16902..17555
DNA (654bp) protein (218aa)
Glutathione S-transferase-like protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12HE6_POLSJ
glutathione S-transferase-like protein
Glutathione S-transferase-like protein {ECO:0000313|EMBL:ABE42046.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM3_127_b2_sep16_scaffold_2668_21
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17684..18634)
DNA (951bp) protein (317aa)
Integrase/recombinase Tax=Acidovorax sp. NO-1 RepID=H0BTT7_9BURK
Integrase/recombinase {ECO:0000313|EMBL:EHL24215.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
integrase family protein
Displaying 21 items

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