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PLM3_127_b2_sep16_scaffold_2951

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2951_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..229)
DNA (228bp) protein (76aa)
Enoyl-CoA hydratase Tax=Pseudomonas sp. Chol1 RepID=K5Z5B8_9PSED
3-hydroxyacyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_2951_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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460..1419
DNA (960bp) protein (320aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00035EB917
vanA; vanillate O-demethylase oxygenase iron-sulfur subunit
Putative vanillate O-demethylase oxygenase, iron-sulfur subunit {ECO:0000313|EMBL:CAE29060.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
PLM3_127_b2_sep16_scaffold_2951_3
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1451..2398)
DNA (948bp) protein (316aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00036A426D
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
PLM3_127_b2_sep16_scaffold_2951_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2364..3545)
DNA (1182bp) protein (394aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
S-adenosylmethionine synthase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXU7_HALNC
PLM3_127_b2_sep16_scaffold_2951_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3752..5245
DNA (1494bp) protein (498aa)
Uncharacterized protein Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4F3_POLGS
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_2951_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5277..6221
DNA (945bp) protein (315aa)
methylenetetrahydrofolate reductase Tax=Rhizobium leguminosarum RepID=UPI00037B9D84
5,10-methylenetetrahydrofolate reductase
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_2951_7
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6221..7069
DNA (849bp) protein (283aa)
purU; Formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927, ECO:0000313|EMBL:CBJ50880.1}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927, ECO:0000313|EMBL:CBJ50880.1};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
formyltetrahydrofolate deformylase Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036CC1EB
PLM3_127_b2_sep16_scaffold_2951_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7088..8089
DNA (1002bp) protein (334aa)
Putative carbohydrate/purine kinase Tax=Oceanibaculum indicum P24 RepID=K2JV26_9PROT
Putative carbohydrate/purine kinase {ECO:0000313|EMBL:EKE78407.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
sugar kinase
PLM3_127_b2_sep16_scaffold_2951_9
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8124..9551
DNA (1428bp) protein (476aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFY4_THIDA
PLM3_127_b2_sep16_scaffold_2951_10

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comp(9682..10413)
DNA (732bp) protein (244aa)
GntR domain-containing protein Tax=mine drainage metagenome RepID=T1DG67_9ZZZZ
GntR domain-containing protein {ECO:0000313|EMBL:EQD80870.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GntR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_2951_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10579..11736
DNA (1158bp) protein (386aa)
isovaleryl-CoA dehydrogenase Tax=Chelatococcus sp. GW1 RepID=UPI0002F75916
isovaleryl-CoA dehydrogenase
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:BAF88831.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
PLM3_127_b2_sep16_scaffold_2951_12
unknown

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11749..11880
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 12 items

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